Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCSSSCCSSSCCCCSSSSSCCCCCCSSSSSSSCCCCSSSSSSCCCCCSSSSSHHHHCCCCSSSSSCCCC MSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA |
1 | 6gmhQ | 0.06 | 0.05 | 2.12 | 1.08 | EigenThreader | | VLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDAYGTATRILQEKVQADEILNNVGALHFRLGNLGEAKKYFLASLDRDCYLRLGAMARDKYEASDWFKEALQINSMLALGNVWLQTLHDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATADYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQ----------------------------------------------------------TLLKARHV------APS |
2 | 4zqaA | 0.98 | 0.25 | 6.92 | 1.02 | FFAS-3D | | ----------------------------------------------------------------------------------------AGTLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELT------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3 | 6gauA | 0.06 | 0.06 | 2.73 | 1.16 | MapAlign | | LEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLGVSVVNAGSTVRFWADPAVFETTEYDFETVARRLQEMAFLLVDFVKHINRTTHEEGGNTEVKSFVQKVCNEQLTHVNKAVSSAQARIAARKARELVRVLKNTEVQAIITALDGQHISTLLLTLLFRFMRPLIENGHVITRNAKIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSNIPPHLVKGPDFPTAGLIVTGRGSIRMRGVVEVEERTSLVITLPYVGLRIVIEILYKHTQLQTSFGANML |
4 | 4zqaA | 0.95 | 0.25 | 7.01 | 2.76 | HHsearch | | --------------------------------------------------------------------------------------SNAGTLQEYQKRMKKLDQQYRERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTG------------------------------------------------------------------------------------------------------------------------------------------------------------ |
5 | 5oikZ2 | 0.07 | 0.06 | 2.43 | 0.56 | CEthreader | | ----------------------REHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENF-VILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLANEL-------------IGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVG--------- |
6 | 1cb5A | 0.05 | 0.04 | 1.93 | 0.92 | EigenThreader | | ------------------------SSSGLNSEKVAALIQKLNSLAQNVGTTHDLLDICLKRATVQRACLNVMRLPFMKKLNSYLFFWDKVERCYFFLSAFVDTAQRLVQFLLMNDMLVNIVEKYG-------------------------------------------------VIPKKCFPESYTTEATCIRLRNLVHSGATKGEISATQDVMMEEIFRVVCICLGNPPETDKNPLEFYREHVKPLFNMEDKICLVNDPRYTVETLYNNQEAVWFGCDVGKHTHAMTFTAVSGAFWRVENSWGEDYLCMTDEWFSEYVYEVVVRKHV |
7 | 6tpiA1 | 0.15 | 0.07 | 2.36 | 0.82 | FFAS-3D | | ------------------------------KSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLTQNTLNQLNKQIDEMNA-SIAKLEQQKAAQERSLAAQLDAALQAYFGYLNQARQETIAQLKQTREEVAMQRAELEEK-QSEQQTLLYEQRAQQAKLT-----------------------------------------QALNERKKTLAGLESS------------------------------------------------------------------------------------------------------ |
8 | 4tqlA | 0.12 | 0.07 | 2.57 | 0.86 | SPARKS-K | | ------------------------------------------------------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKLEKIKKNI-----DDLKKIAEDLIKKAEEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG-------------------------------------------------------------------------- |
9 | 4aurA | 0.09 | 0.04 | 1.62 | 0.60 | CNFpred | | ------------------------------------------------------IQRVTLASRHLDELNTFVNDEDMHRFSNDIKQSRIELAGELFEELNLMEKQLMSQLRPLDDIRPFMDDELGFKLHLRIKQSVDRFFEQSTAVSQRLSDDITRQLSSSESFLSGLGE--GAFRSLGGAFKGV-------------------SKISPATLKTTILAARDTIGKLT----------------------------------------------------------------------------------------------------- |
10 | 3ghgI | 0.06 | 0.03 | 1.37 | 0.50 | DEthreader | | --------------------------------------------------------------------R-----LDERFGS-YC--P-------TTCGIADFLSTYQTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRKMLEEIMKYEASITH-S--------NN-ILKKVLEAQCEPKDVQIHDITGKFIKPLKAHLISTAFKLTNGM---------KFEGNCA-Q----------------------------CHAGHLGVYYQG----KAS------------TPNGYDNGITRWYSMK--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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