Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHSCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MPSLWREILLESLLGCVSWSLYHDLGPMIYYFPLQTLELTGLEGFSIAFLSPIFLTITPFWKLVNKKWMLTLLRIITIGSIASFQAPNAKLRLMVLALGVSSSLIVQAVTWWSGSHLQRYLRIWGFILGQIVLVVLRIWYTSLNPIWSYQMSNKVILTLSAIATLDRIGTDGDCSKPEEKKTGEVATGMASRPNWLLAGAAFGSLVFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFGGAVLLCLASGLMLPSCLWFRGTGLIWWVTGTASAAGLLYLHTWAAAVSGCVFAIFTASMWPQTLGHLINSGTNPGKTMTIAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGTMMLIIGLNMLFGPKKNLDLLLQTKNSSKVLFRKSEKYMKLFLWLLVGVGLLGLGLRHKAYE |
1 | 4gbyA | 0.08 | 0.07 | 2.75 | 1.17 | DEthreader | | YSYIFSITLVATLGGLLFGYDTAVISGTVELNFVQLASLFCVASALIGCIIGGALG-GYCSNRFGRRDSLKIAAVLFFISGVGSAWELYVEFVIYRIIGGIGVGLASMLSPMYIELAPRGKLVSFNQFAIIFGQLLVYCVNYFIA-DGWRYMFASECIPALLFLMLLYTVPESPRLMAVQEIHS-H----GVVIGVMLSIFQQFV-GI-NVVLYYAPEVFKT--LGASTD-IALLQTIIVGVINLTFTVLAIMTFGRKPLQIIGALGMAIGMFSLGFAPGIVALLSMLFYVAAFAMSGPVCWVLLSEIFPALAIAVAAQWLANYFVSWTFPMM-------DKNSWLVAHGFSYWIYGCMGVLAALFMWKFVPETKGKTL------------------------------------- |
2 | 6g9xA | 0.11 | 0.10 | 3.48 | 1.17 | SPARKS-K | | TMPRWVPLLLGLLGSTTCGMLLYAWSVFIKPLSRAEIAMAFAICCLIFGLMTFPAGRLSDKMGP-RKVVMTGGVLLAIGFILSGFIQSKYQLYITYGVMIYLPPIATAPKWWPDRRALATGFAVVGLGGSFLMGPLATYIIE-------WRYVFWYCGVAMGIMALIAGAFLEPPPAGWKPAGAAPKVTRDWTGDTKFWLLYLAYFCGSFAGLMVIGHLAGFGRAGLT---------------AMAAAGAVSS-------LAFSNAATRILSGWFVDKIGIR------VYFAALFALQTAAMIAIFQLGGSGLSIVAIVIGWNYGAMFTLFPATCLQFYGPTA-----QGSNYGLLFTACGLAGFAGPWVGGWLKDTTGT--------YYLPFLCAAALCALGTAIVFMTKPPEKK |
3 | 6g9xA | 0.10 | 0.09 | 3.26 | 1.32 | MapAlign | | ---RWVPLLLGLLGSTTCGMLLYAWSVFIKPLNAESRAEIAFAICCLIFGMTFPAG-RLSDKMGP-RKVVMTGGVLLAIGFISGFIQSKYQLYITYGIAGFGGGMIYLPPIATAPKWWRALATGFAVVGLGLGSFLMGPLA--TYIIEWRYVFWYCGVAMGIMALIAGAFLEPPPAGWKPAGAAPKVTRDWDTKFWLLYLAYFCGSFAGLMVIGHLAGFGRDAGL----TAMAAAGAVSSLAFSNAATRILSGWFVIRVYFAALFALQTAAMIAIFLGGSVGLSIVAIVIGWNYGAMFTLFPATCLQFYGPQGSNYGLLFTACGLAGFAGPVGGWLKDTTGTYYLP---FLCAAALCALGTAIVFTKPPEKKH------------------------------------------- |
4 | 3o7pA | 0.10 | 0.09 | 3.29 | 0.80 | CEthreader | | IIPFALLCSLFFLWAVANNLNDILLPQFQQAFFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFASFGAIIAVVFGQHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIK--NLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQT---------------------------------------------- |
5 | 3wdoA | 0.10 | 0.10 | 3.62 | 0.76 | MUSTER | | YKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGAEALIGIAIGIYGLTQAVFQIPFGLPLIVGGLAVFAAGSVIAALSDSILGRALQGSGAIAAAVMALLSDLTREQNR-GVSFGITFAIAMVLGPIITHKL------LHAL---IAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQWQLVVGVQLFFVAFNLMEALLPSLISKESPYKGTAMGVYSTSQFLGVAIGGSLGGWID--FD------GQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANEALKVRLLETEGVKEVLIAEEEHSID |
6 | 1pw4A1 | 0.10 | 0.05 | 1.71 | 0.50 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKPAPHKA---RLPAAEIDPTYRRLRQIFLGIFFG--YAAYYLVRKNFALAMPYL-VEQ---GFSRGDLGFALSGI-SIAYGFSKVSDRSNPRVF-LPAGLAVMLFMGFVPSIAVMVLLFLCGWFQGMGWPPCGRTMV-HWSQKERGGIVSV-WNCAHNVGGLLGMAW---FND--WHAALYMPAFCAILVALFAFAMMRDTPQSCGLP-PIE--EYKND---------------------------- |
7 | 4q65A | 0.10 | 0.10 | 3.52 | 1.24 | FFAS-3D | | QPAIYYVVALQIWEYFSFYGMRALL---ILYL-TNQLKYNDTHAELFSAYCSLVYVTPILGGFLADKVLMAVMLGALLMAIGHVVLGASYLSLAIIVCGYGLFKSNVSCLLGEDPRRDGGFSLMAGNVGSIIAPIACGYAQEE-------YSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVRATNFLLPNWGWLLVLLVATPALITILFWKEWSVYALGVLAKIYENQKQRELGLIVTLTFFSMLFWAFAQQGGSSISLYIDMFQSINAFAVMLCGRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGLPLMV--LGLAVMGFAELFIVAMSQIVTGVLTG--IYMLLSGAIANYLAGVIADQTSSINAY-------------IEVFDQITWGALACVGVVLMIWLYQA-- |
8 | 3wdoA | 0.10 | 0.10 | 3.53 | 1.45 | EigenThreader | | TPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGEALIGIAIGIYGLTQAVFQIPFGLLSDRIGR-KPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTH---VLNRESGMVKEPRLLKLNFGIMCLHMLLMSTFVALPGQLADA----GFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKFVFCVGLIVVAEIVLWNAQQFWQLVVGVQLFFVAFNLMEALLPSLISKESPYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGV---FLAGAMLAAVWLAVASTMKEPPYKVRLLETEGSKVTNRFEVEQAIRQAL------------------ |
9 | 3rkoB | 0.09 | 0.07 | 2.67 | 1.71 | CNFpred | | -----------DGLSLTMLSVVTGVGFLIHMYASWYMRYSRFFAYTNLFIASMVVLVLADN-------LLLMYLGWEGVGLCSYLLIAAMKAFVVTRVGDVFLAFALFILYNELLNFREMV-MLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAA------------------------------TMVTAGVYLIARTHGLFLMTPEVLH---------------LVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRPLVYLCFLVGGAALSALPL--------VTAGFFSKDEILAGAMANG-----------------HINLMVAGLVGAFMTSLYTFRMIFIVFHGKE |
10 | 7crzA | 0.07 | 0.06 | 2.63 | 1.17 | DEthreader | | TPALIFAITVATIGSFQFGYNTGVINAPEKIKILLTSLWSLVAIFSVGGMIGSFSV-GLFVNRFGRRNSMLIVNLLAVTGGCFMGCKSVEMLILGRLVIGLFCGLCTGFVPMYIEISPRGAFGTLNQLGIVVGILVAQIFGLEFILGSLWPLLGFTILPAILQSAALPFCPESPRLLINQEMKDES---SYRQPIIISIVLQLSQQLSGINAVFY--YSTGIFKDAGVQEPIYATIGAVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLSFVCIGAILVFVAFFEIGGPIPWFIVAELFPAMAVAGCSNWTSNFLVGLLFPSAA--------HYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFED-------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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