Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC MSSPDAGYASDDQSQTQSALPAVMAGLGPCPWAESLSPIGDMKVKGEAPANSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLGLQFPEQGFPAGPPLLPPHMGGHYRDCQSLGAPPLDGYPLPTPDTSPLDGVDPDPAFFAAPMPGDCPAAGTYSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPPSALHVYYGAMGSPGAGGGRGFQMQPQHQHQHQHQHHPPGPGQPSPPPEALPCRDGTDPSQPAELLGEVDRTEFEQYLHFVCKPEMGLPYQGHDSGVNLPDSHGAISSVVSDASSAVYYCNYPDV |
1 | 1vt4I3 | 0.12 | 0.11 | 3.98 | 1.07 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
2 | 7d43P | 0.07 | 0.07 | 2.64 | 1.42 | SPARKS-K | | IGHVAHGVHTVRFKNELETIKLGYANAKIYKLDDPSCPRPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNG---AAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHIIDLVKESQAKEQYEQILAQLKYNIEVVCEYIVKKIPVPDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQE---IEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGGTKIDPTLCRADRMVGQVLGAVGALPEIFTEL----EISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIG-------SLGRVSAVKVLTNP-----------------VCTEVGEKIALSRRVEKHWRLIGWGQIR----------------- |
3 | 1j46A | 0.49 | 0.10 | 2.94 | 1.50 | CNFpred | | ---------------------------------------------------------------MQDRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
4 | 1vt4I3 | 0.11 | 0.11 | 3.97 | 1.50 | MapAlign | | -FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL----------QQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIAKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 1wz6A | 0.32 | 0.06 | 1.89 | 2.26 | HHsearch | | ------------------------------------------------------------GSSGSSGARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYRSGPSSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 4btgA3 | 0.12 | 0.10 | 3.48 | 1.37 | SPARKS-K | | -----------------GFNLKVKDLNGSARGLTQAFAIGELK-------NQLSVGALQLPLQFTRTFSASMTSELLWVYRVGRTATYPDANAVVSSVLTILGRLWSPSTPKELDPSAR---------LRNTNGI-------DQLRSNLALFIAYQDMVKQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPFKLRPINETTSYIGQTS----AIDHMGQP----SHVVVYEDWQ--FAAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTRGTVNSNGAEMTLGFPSVVERDYAALRTGIVDESLEFNYYAAVMHYAVAHNPEVVVSEH-------QGVAAEQG---------------SLYLVWNVRTELRIPVG----YNAIEGGSIRTPEPL----EAIAYNKPIQP |
7 | 1j47A | 0.48 | 0.10 | 2.88 | 1.50 | CNFpred | | ---------------------------------------------------------------MQDRVKRPINAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 2ymuA | 0.07 | 0.07 | 2.83 | 1.29 | MapAlign | | FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVVWGVSASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSV |
9 | 2lefA | 0.30 | 0.06 | 1.90 | 2.26 | HHsearch | | -----------------------------------------------------------------MHIKKPLNAFMLYMKEMRANVVAESTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 5yfpA | 0.06 | 0.06 | 2.40 | 1.27 | SPARKS-K | | EISLNQLLECPIREKNLPWMENQLNLLLKAFQA-----IGSDGNEVEYNLREISGLK------------------------QRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQDISHDQMIRILTTLLIFSPLILFCKEISQKSYQAIVEN----WNVSIQPVYMELISQLQGIDTNDEKMNELSLSQLLNEWDTFRKERKTNDINPVFKNSFSLLTECL----QTMRQECIVYQNFVEVFFHISSKHNFHFNDPDAPPILLDTVKVMQSDEAAVIETQLVSRIFQPIVTRLSSYFVELVKAEPTVLESSNHEFLLSAVTTQIKQVWSDNVEEQVLHFEATTNGEILPGILDPVGLKNSEDLF----QFAKRSMDIKDTDEGYESIELMNSSITDYMETISLLVNSNWLTEMLSM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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