Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCSSSSSSSCCCCCCCCCCCCCCCSSSSSSSCCCSSSSSCCCHHHCCCCCCCCCSSSCCCCCSSSSSSCCCCCSSSSSCCCCHHHHHHHHCCCCCCSSSSSCCCCCCCSSSSSCCCSSSCCCCCCCCCCCCCCCCCCCSSSSSHHHCCCCCCCSSSSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCSSSSCCCCC MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVIDAAKHAHKFCNTEDEETMYLRRPEGIERQYRKKCAKCGLPLFYQSQPKNAPVTFIVDGAVVKFGQGFGKTNIYTQKQEPPKKVMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQELAELEAKKAKMKGTLIDNQFK |
1 | 5j6pB | 0.12 | 0.05 | 1.89 | 0.72 | CEthreader | | -----------------------ESQPSVFQCKKCFQIVGDSNAW--VISHREYLSFTLSDA-----VENSVRVEDTFKRSDDGLCVYSELSCTRCNEVIGKVYNSTPIDMYTFSMDKLQAYQLGN------------------------------------------------------------------------------------------------ |
2 | 4ro1A | 0.05 | 0.05 | 2.32 | 0.57 | EigenThreader | | PKDKRLPFITIHKNDLSDLSILKHHDQLEITRWSIYSGEKLNALLLENLPPDDWIIRRDLRNELIITIDPRDLDDAVSCRANGTYEVGVHIADVCSLERLAFSVEIGKRWFGKTIKTLTLCEISRKLRKDRFAKGAVEINSTELKFQLD---EYGMCEVYEQTDANHLIEEFMLLANRSVAEHISCHFLKSMNFDFELVELFENMAVRSLNRAEYFCTGDFG |
3 | 1x6mA | 0.15 | 0.11 | 3.77 | 0.49 | FFAS-3D | | -PAV--------DNGIKPAQPGFAGGTLHCKCSTNPVRVAVRAQTAHNHWKPEGAIFSQVAVVGRDALEVLEGAEKLEIVNAEAPIQRH--RCRDCGVHMYGRIENRDHPFYGLD----------------------------------------FVHTELSDEDSSIIESGVDPSRMEAIRARLRELLEPYDALSPPLMDAIATHIAKRS--GAL------ |
4 | 7jtkA | 0.12 | 0.12 | 4.10 | 0.71 | SPARKS-K | | VP--VTRQFQDQSDEASAGRAAEPAP-------VKKLRIDLSWTF--WPPPPPPEEPALE---YNLVMYNKDGEEVQSISTGNREATGARAGRPKERDVIYLDLPAEVRSMVLLVTNDVSNGEAPLPAAEQGLAAPPNPERVLADYGVLSKKATTQVALMKLYADSAFNVFRGAVAAFIGQPDTIINQLKAYLEATKKQKAAEAAAAAAAEESGEEITADPK |
5 | 2eadA | 0.09 | 0.06 | 2.43 | 0.69 | CNFpred | | -------------------------EYRRDLNLS-KGKADVTFKHDGVTY---TREYFASNNVMVARLTASKGKLNFNVSMP-NYSKTGETTTVK-GDTLTVKGALGNNGLLYNSQIKVVLDNGEGTLSEG-------GASLKVSDAK---AVTLYIAAATDYKQYPSYRTETAAEVNTRVAKVVQDAANK--------------------GYTAVKKAHID |
6 | 3w0lB | 0.03 | 0.02 | 1.30 | 0.67 | DEthreader | | VRDAEIFRLYSESV-KT--D------VAKRVEVLK-LVVLS-----------------GCGT-SGRLALLLANS----------------FNGLLTPCYCYIMSIVTSQESEGELKVCVFCHLDVY-----------QKGFILNPAVGPEGVSMKATLLLV-VTEKCLLEILRTYERAHKVTYSQS-KKI---AALMKQTATSLKKGH--R-------VKNV |
7 | 2pffB | 0.08 | 0.07 | 2.91 | 0.87 | MapAlign | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAQDVWNRADNHFPALTLMEKAAFEDLKSKGLIIESLVEVVFYRGMTMQVAVP------- |
8 | 1x6mA | 0.14 | 0.10 | 3.55 | 0.49 | MUSTER | | DTSGVK-----IHPAVDNGIKPAQPGFGTLHCKCSPVRVAVRAQTAHN--WKPEGAAVVGRD----ALEVLEGAEKLEIVNAEAP--IQRHRCRDCGVHMYGRIENRDHPLDFVHTELSDEDGWSAPEFAAF--------------------------------------VSSIIESGPSRMEAIRARLRELGL-ALSPPLMDAIATHIAKRSGALAA---- |
9 | 3facA | 0.11 | 0.05 | 1.78 | 0.76 | HHsearch | | ---------------------------MKGTCHCGAVEIEVELLNG--FARRRGAIAATA-RLSDLRVVRGA-ENLTLYQFGT--RTAKHWFCRTCGIYTHHQRRS-NPEEYGVNVAILEGVNPRDL----------GEVPWT------------------------------------------------------------------------------- |
10 | 4v2yA | 0.09 | 0.04 | 1.54 | 0.69 | CEthreader | | -------------------------ASIFRCRQCGQTISRRDWLLPMGGDHEHVAGMIFRVWCFSLAQGLRLIGAPSGEFSWFKGYDWTIALCGQCGSHLGWHYESQPQTFFGLIKDRLAEGPA-------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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