>Q9H5P4 (225 residues) MAQGFAVGFDPLGLGDLSSGSLSSLSSRGHLGSDSGSTATRYLLRKQQRLLNGPPRGIRA SSPMGRVILINSPIEANSDESDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGS SAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMMVRRMGRVPGIKFSKEKTT WVDVVNRRLVVEKCGSTPSDTSSEDGVRRIVHLYTTSDDFCLGFN |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MAQGFAVGFDPLGLGDLSSGSLSSLSSRGHLGSDSGSTATRYLLRKQQRLLNGPPRGIRASSPMGRVILINSPIEANSDESDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMMVRRMGRVPGIKFSKEKTTWVDVVNRRLVVEKCGSTPSDTSSEDGVRRIVHLYTTSDDFCLGFN |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCSSSSCCCCCCCCSSSSSSCCCCHHHHCCCCCCCSSSSSCCSSCCCCCHHHHHHHHHCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCC |
Confidence | 986523677886445677787665556666677788855211124544445788876556788766544567767787777725999999689997657996356779865999977999467619998839999999778999999999999719939999997788998766667888767666766778789999888777887530456655887542659 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MAQGFAVGFDPLGLGDLSSGSLSSLSSRGHLGSDSGSTATRYLLRKQQRLLNGPPRGIRASSPMGRVILINSPIEANSDESDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMMVRRMGRVPGIKFSKEKTTWVDVVNRRLVVEKCGSTPSDTSSEDGVRRIVHLYTTSDDFCLGFN |
Prediction | 724434242541424514544354344454446464444444345466544744475455454444444354435465645531130303258833000001013557320102303761402432034202004014330561316301510472740201022345246353465635445456553437646543454447644433331335564301128 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCSSSSCCCCCCCCSSSSSSCCCCHHHHCCCCCCCSSSSSCCSSCCCCCHHHHHHHHHCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCC MAQGFAVGFDPLGLGDLSSGSLSSLSSRGHLGSDSGSTATRYLLRKQQRLLNGPPRGIRASSPMGRVILINSPIEANSDESDIIHSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTSSSRLHMMVRRMGRVPGIKFSKEKTTWVDVVNRRLVVEKCGSTPSDTSSEDGVRRIVHLYTTSDDFCLGFN | |||||||||||||||||||
1 | 4ri0A | 0.22 | 0.17 | 5.48 | 1.29 | SPARKS-K | PKKKLPVL--LLGHSADLRPGESPFALQNTVTTGIVSTDMDYIQTDAI--INYGNAGGPLVNLDGEVIGINTLKVTAGISSDRITRFLTKDWKKRFIGIRMRTITEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVD--SSELQEAVLTESPLLLEVRRGN--------DDLLFSIAPEVVMGGHHHH------------------------------- | |||||||||||||
2 | 4ynnA | 0.22 | 0.16 | 4.91 | 1.67 | CNFpred | -----------------------------------------ALVNA-----KGELIGINTAIIVGIGFAIPINMA-----KDVAQQIIKFGIHRGLMGIFVQHLTEDFQGALVSQVNQNSPAQLAGLKSGDVIVQINDTKITQTQVKTTISLLRAGSTAKIKILRD--------NKPLTLDVEVTDIKKHEQKLQSNNPFL-----GLALRNFEQES-PPHGNVV | |||||||||||||
3 | 2xkxA2 | 0.22 | 0.16 | 5.04 | 1.11 | MUSTER | ----------PDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKD--------------------LLGEEDIPREPRRIVIHRGSTG-LGFNIVGGED-GEGIFISFILAGGPADLSGLRKGDQILSVNGVDLRNASHEQAAIALKNGQTVTIIAQYKPEEYSRFEAK-------IHDLREQLMNSSLGSGTAS----------------------- | |||||||||||||
4 | 6z05A | 0.20 | 0.19 | 6.10 | 1.20 | HHsearch | SAITF-TNSDDLMEGDVVFALGNPFGVGFSVTSGIISALNKDNIG--LNQYENFIQGNSGVDSRGYLVGINSAILSGFPSKDIAKKLIEGKIDRGFLGVTILALQKNQEGALITDVQKGSSADEAGLKRGDLVTKVNNKVIKS--PIDLKNYIGTGQKISLSYERDG--------ENKQASFILKGEKENPKGVQSDLIDPRLRLQIVNGVLVDSVKKSKNSGFQ | |||||||||||||
5 | 5xdyA | 0.17 | 0.14 | 4.65 | 0.38 | CEthreader | RVGDEVLAVGAPLGLRSTVTQGIVSALHRPVPLSGSDTDTVIDAIQTDASINHGNAGGPLIDMDAQVIGINTAGKGLGFKLVANSLIKDGKIVHPTLGISTRSVSAIASGAQVANVKAGSPAQKGGILENDVIVKVGNRAVADSEFVVAVRQLAIGQDAPIEVVREG--------RHVTLTVKPDPDSTKL---------------------------------- | |||||||||||||
6 | 1n6fA1 | 0.11 | 0.10 | 3.55 | 1.00 | EigenThreader | TFELPHWKGYRGGTRGMSTHVIDGFGDGKDLTSFTDYYPRHLNTD----GRRIGSIYIFNP--DTEKIEKILVPLCKTRYDLSNVIVMGDPFRSGRIACDFKL--DGDHY-VVAKAYAKSPIFEYGIDTGYLIEDIDGETVGAGSN--IYRVLSEKAGTARIRLSGKGGD-------KRDLMIDILDIRYRSWVEANRRYVHERSKGTI--GYIHIPDMGMMGLN | |||||||||||||
7 | 1uf1A | 0.40 | 0.16 | 4.85 | 1.00 | FFAS-3D | --------------------------------------------------------------------------------------VNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTVKDVGRLPHARTTVDE----------------------------------------------- | |||||||||||||
8 | 6z05A | 0.18 | 0.17 | 5.64 | 1.28 | SPARKS-K | IEANNLSAITFTNSDDLMEGDVNPFGVGFSVTSGIISALNKDNIGLNQYQTDASINGNSGVDSRGYLVGINSAILSRNMVKDIAKKLIEKKIDRGFLGVTILALQKNQEGALITDVQKGSSADEAGLKRGDLVTKVNNKVIKS--PIDLKNYIGTGQKISLSYERDG--------ENKQASFILKGEKENPKGVQSDLKDRLQIPKDVNGVLVDSVKEKSKGKNS | |||||||||||||
9 | 3pv2A | 0.24 | 0.16 | 5.12 | 1.64 | CNFpred | --------------------------------------------------------GGALVNAKGELIGINTAIPIN-MVKDVAQQIIKFGIHRGLMGIFVQHLTEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKIT--QATQVKTTIS-GSTVKIIVERD--------NKPLTLSAVVTDIKSHEQKLQSNNPFL-----GLALRAFEQESHGNVIGVQ | |||||||||||||
10 | 5il9A | 0.08 | 0.06 | 2.43 | 0.83 | DEthreader | FCSGSSGFLTN----AHSVEHHTQVKLKSDTKY------L--------------A-TVLAIG----DIALLTVTDFWVSPVGGPGIIFIYYTGFPVLGIEWQKMENPQKGVRIRRIEPTAPESQ-VLKPSDIILSFDGVNIANDGTIGFSYLISQKYSALVKVLRN-------K-EILEFNIKLAIHKRLIPA-------------SEYGKEYEFLE--LH---- | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |