Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680 700 720 740
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCSCCCCCCCCCCCCCCCSSCCSSCCCCCCCCCCCCCSSCCCCCHHHHHHCHCCCCCCCCCCCCCCCCCCCCSCCCCCCSCCCCCCHHHHHCSCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCHHHHCCCCCCCCCSCCCCCCCCSSSSCCCCCCCCSCCCCCCSCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHCHHCCCCCCCCSSCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCSCCCCCCHHHHCCCSCCCCCSSCCCCCCCCCCCCCCSSSSCCSCCCCCCCCCCCCCCCCCCSCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCSSCCCCCCCCCCCCCCCCCCCCCCSSCCSCCSSCCCCCCCCCSCCCCCSSSSSCCCCCCCCCSCCCCCCCCCCCCCSCCCCCCSSSSSSCCCCCCCCCCCCCSSCCCCCCCCSSCCCCCCCCCSCCCCCCSSSCCCCCCCSCCSCCCCCCCCCCCCCCCCCCSSSCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCSSSCCCCCCCCCCCCCCHHHHHHHCCC SSGTDGFRSENDTNWDPQKEFIQFLMTNEETVDKAPPHSKIGLEKKRKRKMDVSKITRYTEDCFSDSNCVPNKSKMQEVDFLEQNEELQAVDSQKYALSKVKPESTDEDLESVDAFQHLIYNPDKCGEESSPVHTSTFLSNTLKKKCEESDSESPATFSTEEPSFYPCTKCNVNFREKKHLHRHMMYHLDGNSHFRHLNVPRPYACRECGRTFRDRNSLLKHMIIHQERRQKLMEEIRELKELQDEGRSARLQCPQCVFGTNCPKTFVQHAKTHEKDKRYYEPVDSDSTKTLTKQQSTTFPKNSALKQDVKRTFGSTSQSSSFSKIHKRPHRIQKARKSIAQSGVNMCNQNSSPHKNVTIKSSVDQKPKYFHQAAKEKSNAKANSHYLYRHKYENYRMIKKSGESYPVHFKKEEASSLNSESKKESSVGGEDLDSYPDFLHKMTVVVLQKLNSAEKKDSYETEDESSWDNVELGDYTTQAIEDETYSDINQEHVNLFPLFKSKVEGQEPGENATLSYDQNDGFYFEYYEDTGSNNFLHEIHDPQHLETADASLSKHSSVFHWTDLSLEKKSCPYCPATFETGVGLSNHVRGHLHRAGLSYEGKTKWDAHKSPICVLNEMMQNEEKYEKILKALNSRRIIPRPFVAQKLASSDDFISQNVIPSGSKKKMLTLPHGADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS |
1 | 7cunH | 0.07 | 0.07 | 2.84 | 1.22 | EigenThreader | | QPPPDNKRNRILKLLALKVAAHLKWDLDILEKSLSVPVLNMLLNELLCISKVP----PGTKHVDMDLATLPPTTAMAVLLYNRWAIRTIVQSS---FPVKQAKPGPEQAADSILVLEAALKLNKDLYVHTMRTLDLLAMEPGMVNGETESSTAGLCQVCYDLGAAYFQQGSTNSAVYENAREKFFRTKETPYFIEDNLTLSLPVQFRQSVLRELFKKAQQEICFKVCACNTVRDILEGEKIDFLLEVCSRSVNLEKASESLKGNMAAFLKNVCLGLEDLQYVFMISSHELFITLLKDEEPRVNLCIKPVT--SFYDIPASASVNIGQLEHQLILWRIRQILIELHGMTSERQFWTVSILGIKDNLTRDLVYILMAKGLHCSTVKDFSHAKQLFAACLELVTEF-SPKLRQVMLNEMLLLDIHTHEAGTGQAGERPPSDLISRVRGYLEMRLPDENEYLTLQVPAFLLQSNPYVKLGQLLAATCKERRTAKDLWEVVVQICSVSSQRVSLIKQRESTLGIMYRSELLSFIKKLREPLVLTIILSLFVKLHNVREDIVNDITA----EHISIWPSSIPNLQSVDFEAVAITVKELVRYTLSINPNNHSWLIIQADIYFATVCSDFVIKRMIKCCSLLNCHTQVAILCQFLREIDYKTAFKSLQEQNSHDAMDSYYDYI--------WDVTILEYLTYLHHKRDKRQIAIKAIGQTELNASN-----------PEEVLQLAAQRRKKKFL |
2 | 5yfpE | 0.09 | 0.08 | 3.17 | 1.29 | SPARKS-K | | DNFLGGLTVNEELSKDHRND-----VLIDANTKNLPTNEKDQDAIREAIWKQLDP-KPYIRTFESTLKELKNLNEETLNKRQYFSEQVATQEVIHSENVIKLSKDLHTTLLTFDKLDDRLTNVTQVVSETAIKKKQNYIQSVELIRRSMGKSDIVEQLRLSKNWKLNLKSVKL---------MKNLLILSSKLETSSIP-----------------KTINTKLVIEKYSEMMENELLENFNSAYRENNFTKLN---------------EIAIILNNFNGGVNVIQSFINQHDYFIFIK--NVKFKEQLI-DFENHSVIIETSMQNLINDVETVIKNESKIVKRIQRVFAQKIEPRFEVLLRNSLSSNLAYVRILHGLFTLFGKFTKSLIDYFQLLIDDSNQILSTTLEQCFADLFSHYLYDRS-------KYFGIEKRSLEAILVDMTSKFTVNYDKEINKRVLLDKYKEKIDNSPNSPANYSLNDVDSMLKCVVESTARVMELIPNKAHLYILEILKIMFLGIVDSYMEIALEVAYWKICKVDINKTAGVVN-------------------LNFLKFISMSTEILDLLSISIKSIPLLNNSPEIKAQIIEMTNSQIQKMEILINSTKFSAILCKKKKDFVPKSQELLDQDTLPAIEEQSSKFLKGKNLQLTLIGEELYLLLSHYSHFQVIGGVVVTKDII-GYQTAIEDWGVASLIRELANLFTVQPELESLTKEGHLADIGRDII |
3 | 1vt4I | 0.05 | 0.05 | 2.44 | 2.26 | MapAlign | | -KEEIDHIIMSKDAVSGTLRLFWTLLVQKFVEEVLRINYKFLMSPIKTEQRQPSMMMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSKIFWLNLKNCNSPETVLEMLQKLLYQIDHSSNIKLRIHSIQAELRRLLKSKPYENCDKLTTIIESSLNVLEPAEYRKMFYSLVEKQPKESTISIPNTLQQLKFYKPYIPKYERLVNAILDFLPGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- |
4 | 2pffB | 0.08 | 0.07 | 3.01 | 0.90 | CEthreader | | GSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQE--------------QVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLDINPDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 6wvjD | 0.06 | 0.06 | 2.45 | 1.20 | EigenThreader | | TINYRTLKPEKDGLFCERIFG------PTKDWECDRCGVEVTRAKVRRERMSYVVTDPANTPLEKKQDIDLVKEVDMLKEELTRAIKRLEVLEAFRNSGNKPPELRPYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNEMALELFKPFVMKELVEKGLAHN--------IKSAKRKIERVWDVLESVILVCTAYNEAQAEARILMLAAQNILNPKDGKPVVTPLAYQNGYVHLHTRVKNVTFTEEQRSKLLITTVFPYMNEPTKSNIEEKTPDRFKGADVKAVIAQQPIKMLDRMKNLGFKYSTKAGITVGVSDIVVLDDKQEILEEAQSKVDNVMKQFRRGLIVISIWSAAKDVIQGKLMKSLDELNPIYMMSDSGARGNASNFTQLAGMRGLMANP----------AGRIIELPIKSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDVETDCGTD-----RGILAKPLKEG--TETIER----LEERLIGRFARKQNELIDEDKALEIVEAGIEESAFTCNTPHGVCKRCYGRN-----LATGSDVEVGEAVGIIAAQSIGEPGTQLRIQELFEARNPKGQATITSYTAPYNSRLKVAEGDKITRGQVLTEGSIDMLRKVRVIDAGDTDVLDIHQFTEANKKVL----------LEGNRPATGRPVLLGITKASLETDSFLSAASFQE |
6 | 6zywY | 0.17 | 0.16 | 5.11 | 0.82 | FFAS-3D | | --------------------FNFFSSANNQNIPKYSVNDFVFRLKKIKEGLDGFLLINGVDSRENTEYVKLTNWLFLGNSGLEIEENEYLNQIYSDMIVLIKKGTTHIDPEALNSLQTLIYSPTEKQYEDK--DEMELLKMAFFLRVMKPTKKVGILLGQKDKGKYGLEELGVGFFSMNHLTLRLNAVYKNYDKFFVSKLIYVVAKRLTGH-FNSAAGQLGDMKMHKRNESQLTEIFRDTKWVQIRGVNAALPKPRVLFGKNSADCSKEPSVAPLKDLKYSE--TFHSFHATFETFDLRTCLRAALAKGVKITLNDDEGVPQGYELNIDENQQYKDQDFLANLYLSI-------------------------IIGFNEVMQLITKDYKNMTEEFIQDYIFQKVSKVYAGFQIPESEITLDEEVKIDFKDTISFKLTPYFFMVRSLVFAESFILQEGCYLLLTKEIPYFDLWNCQNDYSEKIEKMKGKQISDE------LPKNRI-FVQTGRKSNYGFDIPIMQASYYMHELGLRIETQRLFFKEMKEIQITQKMNHTWLIFKVDSNITFNSISKDTIALETGDALEQKIKNYFEENQIKYEYQVDIPAIFQESQIAKKQILNNEQFSKQLMILNQMKDLKLSAYKNLYEQMQ--ISQAITPVENKRKFAEIRFGSDNNLRLHLYKFDLNEMSELT-EKSYLSGLLKFASEKKIQNTDVIVASVPHFINTKILIDYFSKSEKISNA-- |
7 | 7abiA | 0.09 | 0.09 | 3.38 | 1.28 | SPARKS-K | | MNHTNSYGIIRGLQFAFIVQYYGLVMDLLAGPPQMPNDFLSFQDIATEAAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLKHDVNLGRAVFLPRSVTTVQWENSFVSVYSKDLPKCRTSYEEFTHKNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKPVVFYTPKELGGLGMLS--MGHVLIPQSDLRWSK-----QTDVGITHFRSGMSHEEDQLIPNLYRYIQP--------WESEFIDSQRVWAEYALKRQEAIAQN--RRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTFPTWEGLFWQIPNRRFTLWWSPTINRANVYVQVQLDLTGIFMHGKIP--TLKISLIQIFRAHLWQKIHESIVMDLCQVFD-QELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDV-------MDSTTTQKYWIDIQLRWGDSHDIERYARAKFLDYNMSIYPSPTGVLIALIQQAMAKIMLRERIRKGLQSNQIIW-FVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWQKRLGQLAKWKTAEEVAALIRSLPEEQPKQIIVTRLLDFPNIVIKGSELQLPFQACL |
8 | 3gjxA | 0.11 | 0.06 | 2.28 | 0.73 | CNFpred | | -------------------ILVQILKQE---------------------------WPKHWPTFISDI-----------VGASRTSESLC--------------------QNNMVILKLLSEEVFDFSSGQITQVKAKHLKDSMCNEFS--------------QIFQLCQFVMENSQNAPLVHATLETLLRF------NWIPLGYIFET-----KLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFE--------TLFTLTMMQLKQ-----------------MLPL-------------------------NTNIRLAYSNGKDEQNFIQNLSLFLCTFLKEH------GQLLEKRLNLREALMEALHYMLLVSVEETEIFKICLEYWNHLAAE----LYRESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLMVSRMAKPEEVLVVENDQ--------------------------------------------------------GEVVREFMKDTDSINLYKNMRE-------------------------------TLVYLTHLYVDTEIIMTKKLQNQVN--GTEWSWKNLNTLCWAIGSISMHEEDEKRFLVTVI-----------------KDLLGLCEQKRGKDNKAI-----ASNIMYIVGQYPRFLRA-HWKFLKTVVNKLFEFMHET------------------------------------ |
9 | 3javA | 0.05 | 0.03 | 1.23 | 0.50 | DEthreader | | ----------NSGQDVLEVVKQI-KLLAPDGPMLRLEELGDQRFRHGYDVLEDTITALLHNNRK-LLEK-----------------------VSMNKSIPVTELKEVWLFWREDRDVLSYQTMEFVEEYLRDVVCQRFPFSDKEK------------NK--TFEVVNLARNLLVHMVMDTKLK---------------------IE-ILQFIL--------NV--LD-YRISCLLCIFKREF-SNSQSSETSSGNS--------------EQAILSGALQLFRHSRQELQKQQLTQIKQDLDQLRVCESASVRKS-RKQQQRLLRNMGAHAVVLELLQIPY--------------------------------------HINLF------------------------------------------------------------------------LEAVTMQHIFNFQLCENERVVQHFV----------AELVNSGDVLYNRFNVYTEIK------KIY--------------------------------------------------------PLVQAELSV--D---GFICKLIKHT----KL-IKVLQTLRHGASNLVIDLIMNA---SSDRVFHESLLYMKVAQQEIKATVTVNT-DLGNMVIIMQPILRF-----------------------------------------------NEKNVLINLLELKNNASKLLSK |
10 | 1vt4I3 | 0.04 | 0.03 | 1.58 | 1.95 | MapAlign | | ------------LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------GGGGGGGGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------GGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|