Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCSSSSCCCCCCCCSCCCCCCSSCCHHHHCCCCCCCCCSSSSCCCCCSCSSCCCCCCCCCCHHHCSSSCCCCCCCCCSCSSCCCSSSSCSSCCSCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCSSCCCCCCCCCCCCHCHHHHCCCCCCCCSSCCCCCCSCCCCHHHHHHHCCCCCCCCSSCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC MMGSVLPAEALVLKTGLKAPGLALAEVITSDILHSFLYGRWRNVLGEQLFEDKSHHASPKTAFTAEVLAQSFSGEVQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGLEEDQKKNKHEDFHPADSAAGPAGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTGERPYKCQVCQSAYSQLAGLRAHQKSARHRPPSTALQAHSPALPAPHAHAPALAAAAAAAAAAAAHHLPAMVL |
1 | 4ijdA | 0.26 | 0.15 | 4.62 | 0.70 | CEthreader | | -------SEPQDDDYLYCECQNFFIDSCAAHGPPTFVKDSAVDK------------------------------GHPNRSALSLPPGLRIGPSGIPQAGLGVWNESDLPLGLHFGPYEGRITEDEEAA---NNGYSWLIT-KGRNCYEYVDGKDKSWANW-RYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYGDEYGQELGIKWGSKWKKEL-------------------------------------------PKPEIHPCPSCCLAFSSQKFLSQHVERNHSS----------------------------------------------------------------------- |
2 | 5czyA | 0.08 | 0.07 | 2.57 | 0.70 | EigenThreader | | ----------------------------------------------------------DEWIDTSKIMLDLHISSDYIPSAIDRTDLVMVQSVLRKTGGRGLFAREDIPKGTCIYTGEV-YSEQEFEQYLKEHSYAMYVG----GR--VIDAARKGNLTRYINFSDSQDNAEF--VETTLNRKKVAKVITTKNIKAGQQLLINYNYYFLNPGDGWLSAQEFYQTYQSQYYSLAKEQELNLPFLKVGSDEKILDFDIDIIQLLIKNQVNLLVHDRSDKTFLHNAALVLYFTYIDENDFDHCYNNKLFDKALVLLAFYFKRNYMSDNNQFNINAFRKAIKDFNSNERSILLMQLRESDLLEQLG----- |
3 | 5ecjA | 0.28 | 0.19 | 5.84 | 1.40 | FFAS-3D | | ---------------------------FTEEELSFVLYGAIASPEHPTDLQHAISGIS-----------------------LQLPEGLCLMQTSFGDPHFGVFCSDFIAKGVRFGPFRGRVVNASEVKAHRDNSRMWEIFE-DGHLSHFIDGKGS--GNWMSYVNCARFPKEQNLLAVQHQGQIFYESCRDIQRNQELLVWYGNGYEKFLGVP-------------------MNLRVTSSGSLPA-TCGAQLSKLKRFLTTLQQF-----------GNDISPEIGEKVRTLVLA-----------LVNSTVTIEEFHCKL--------QEATNFPLRPFVIPFLKANLPLLQRELLH---------- |
4 | 4ijdA | 0.25 | 0.14 | 4.47 | 1.62 | SPARKS-K | | ---------------------------SEPQDDDYLYCECQNFFIDSCAAHGPPTFVKDS----------AVDKGHPNRSALSLPPGLRIGPSGIPQAGLGVWNESDLPLGLHFGPYEGRITEDEEAA---NNGYSWLITKGRNC-YEYVDGKDKSWANW-RYVNCARDDEEQNLVAFQYHRQIFYRTCRVIRPGCELLVWYGDEYGQELGIK-WGSK--WKKELPKPE------------IHPCPSCCLAFSSQKFLSQHVERNHSS--------------------------------------------------------------------------------------------------- |
5 | 5ecjA | 0.29 | 0.19 | 5.89 | 4.33 | CNFpred | | --------------------------NFTEEELSFVLYGAIASPE------------------HPTDLQHAISG------SLQLPEGLCLMQTSFGVPHFGVFCSDFIAKGVRFGPFRGRVVNASEVKAHRDNSRMWEIFED-GHLSHFIDGK--GSGNWMSYVNCARFPKEQNLLAVQHQGQIFYESCRDIQRNQELLVWYGNGYEKFLGVPMNLRVT--------------------SSGSLPATCGARQKLKRFLTTLQQFGNDISPGEKVRTLVLALVNSTVT-IEEFHCKLQ-EATNFPLRPFV-IPFLKANLPLLQ--------------------------------------------- |
6 | 6mu1A | 0.05 | 0.04 | 1.77 | 0.67 | DEthreader | | SDNDASRLHM-EQVTPKEAIDDYSFAQMEFVEEYLRDV----FPFSD---------K-EKNKLTF------------SDLLRLTKI---ILCVPE--DIVMDKLKIIEI-QFILN--L---------------------LDFEHIEEEGIFG-R-LRVLLHLTMHDYPPLVSGLQLFFQRQLSVD--QENEE-----LCIKVLQTLREMMT---EILLAIALLEGGNTNHNRD--------------IVRLDRT-QG-KINDFFLRSEDLFNEM--Q---GYR------EEILKTTCFRFDKTVTFEHIEEHNFPRMRAMSL-SSEEQNELNLQKLESMKLTNLSGQLSELKDQMTEQRKQKQRIGL |
7 | 1vt4I3 | 0.07 | 0.06 | 2.49 | 1.16 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------------------------------- |
8 | 5v3jE | 0.15 | 0.11 | 3.75 | 1.54 | MUSTER | | -------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFQLSLHHRVHTDEK--CFECKECGKAFMRPSHLLRH--QRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSH------TGEKPHKCKECGKGFISDSHLLRHQSVHTGET------PYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGR--------------------GSELSRHQK |
9 | 5ecjA | 0.26 | 0.19 | 5.71 | 1.67 | HHsearch | | -------------------------FNFTEEELSFVLYGAIASPEHPTD-----------------------LQHAISGISLQLPEGLCLMQTSFGVPHFGVFCSDFIAKGVRFGPFRGRVVNASEVKAHRDNSRMWEIFE-DGHLSHFIDGKG--SGNWMSYVNCARFPKEQNLLAVQHQGQIFYESCRDIQRNQELLVWYGNGYEKFLGVPMNLRVT-----------------SSGSLPATCGARQLSKL--KRFLTTLQQFGNDISPEIGEKVRTLVLALVNSTVTIEEFHCKQEATNFPLRPFVIP-FLKANLPLLQRELLHCARAA----------------------------------- |
10 | 5ecjA | 0.26 | 0.19 | 5.71 | 0.69 | CEthreader | | -------------------------FNFTEEELSFVLYGAIASPEHPTD-----------------------LQHAISGISLQLPEGLCLMQTSFGVPHFGVFCSDFIAKGVRFGPFRGRVVNASEVKAHRDNSRMWEIFE-DGHLSHFIDGKG--SGNWMSYVNCARFPKEQNLLAVQHQGQIFYESCRDIQRNQELLVWYGNGYEKFLGVPMNLRVTSSGSLP-------------------ATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALVNSTVTIEEFHKLQEATNFPLRPF-VIPFLKANLPLLQRELLHCARAA----------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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