Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCSSSCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCSSSSSSSSCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCSSSCCHHHHHHCCCSSSSSSSSCCCCCCCCHHHHHHHHHHCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCSSSCCCCCHHHHHHHHHHCCCCSSSSCCCHHHCCCCCCCCCHHHHHHHHHHCCSSSSSSCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCSSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC MQPTGREGSRALSRRYLRRLLLLLLLLLLRQPVTRAETTPGAPRALSTLGSPSLFTTPGVPSALTTPGLTTPGTPKTLDLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKKNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSPVEAEFPYGQLSTSCHSHLVPQNGHQATHLEVTKQPTNRVPWRSSNASPYLVPGLVAAATIPTFTQWLC |
1 | 1ituA | 0.49 | 0.36 | 10.41 | 1.17 | DEthreader | | -----------------------------------------------------------------------------DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDANLTTLAGTHTNIPKLRAGFVGGQFWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPEFLYVTSSAGIRQAEKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQAS--NLTQAPEEEPIPLDQLGGSCR----------------------------------------------------- |
2 | 6vgoA | 1.00 | 0.72 | 20.08 | 2.86 | SPARKS-K | | -----------------------------------------------------------------------------LDLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKKNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSPVEAEFPY------------------------------------------------------------- |
3 | 3itcA | 0.46 | 0.33 | 9.51 | 1.45 | MapAlign | | -----------------------------------------------------------------------------MTSLEKARELLREFPVVDGHNDLPWALREQVRYDLDARDIADQSHLHTDLARLRSGGVGAQYWSVYVRSDL--PGAVTATLEQIDCVRRLIDRHGELRAALTAADMEAARRIASLMGAEGGHSIDNSLATLRALYALGVRYMTLTHNDNNAWADSATD-----EPGVGGLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQAAVATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLDRGWSQSDLAKLTWKNAVRVLDAAEDVSRGLRARGPSNATIEQLDG---------------------------------------------------------- |
4 | 3itcA | 0.45 | 0.32 | 9.29 | 1.05 | CEthreader | | -----------------------------------------------------------------------------MTSLEKARELLREFPVVDGHNDLPWALREQVRYDLDARDIAADQSLHTDLARLRSGGVGAQYWSVYVRSDLPG--AVTATLEQIDCVRRLIDRHPELRAALTAADMEAAGRIASLMGAEGGHSIDNSLATLRALYALGVRYMTLTHNDNNAWADSATD-----EPGVGGLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQRPVATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLDRGWSQSDLAKLTWKNAVRVLDAAEDVSRGLRAARGPSNATIEQLDG--------------------------------------------------------- |
5 | 1ituA | 0.48 | 0.36 | 10.43 | 2.15 | MUSTER | | -----------------------------------------------------------------------------DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDANLTTLAGTHTNIPKLRAGFVGGQFWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPEFLYVTSIRQAFREGKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQASNL--TQAPEEEPIPLDQLGGSCRTHYGYSS---------------------------------------------- |
6 | 3itcA | 0.45 | 0.32 | 9.40 | 4.52 | HHsearch | | -----------------------------------------------------------------------------MTSLEKARELLREFPVVDGHNDLPWALREQVRYDLDARDIAASAHLHTDLARLRSGGVGAQYWSVYVRSDLPG--AVTATLEQIDCVRRLIDRHPGLRAALTAADMRAEGRIASLMGAEGGHSIDNSLATLRALYALGVRYMTLTHNDNNAWADSATD-----EPGVGGLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQAPVATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLDRGWSQSDLAKLTWKNAVRVLDAAEDVSRGLRARGPSNATIEQLDG---------------------------------------------------------- |
7 | 6vgoA | 1.00 | 0.71 | 19.97 | 2.83 | FFAS-3D | | ------------------------------------------------------------------------------DLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKKNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSPVEAEFP-------------------------------------------------------------- |
8 | 5lwzA | 0.36 | 0.27 | 8.00 | 1.50 | EigenThreader | | ----------------------------------------------------------------------------PSPIEEQATRLLKEVPLIDGHNDFPYMIRGWFRNDINGQHLYDMPIGQTDLQRLQKGLLGGQFWSAFVPCPKNPDEALRQTLQQLDVIHRLIERHPTILQFADSWSSFRAGRVASLIGIEGLHQIADSVSALRMLHRLGVRYVTLTHNCHNAFADAATVS----PELHGGLSRKGERLIRELNRMGMMIDLSHTSHEAQTQALRLSRAPVIYSHSSIYSLRAHARNVTDENLHLLHRNRGVVMICFLRELLASADQATLAHVIDHIIYAGTRIGYEHVGIGSDFDGMLRGPDGLHDVSCYPALVAGLLERGVSEEDVKRVMGLNVIRVLEEVERVAAELQGAGEE------------------------------------CLCDELDEVWNEDIKEQLTRERERVRKL--- |
9 | 6vgoA | 1.00 | 0.72 | 20.08 | 3.29 | CNFpred | | -----------------------------------------------------------------------------LDLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKKNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSPVEAEFPY------------------------------------------------------------- |
10 | 6vgoA | 0.99 | 0.71 | 19.91 | 1.17 | DEthreader | | -----------------------------------------------------------------------------LDLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVGAQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIGVEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRH-MYTNVSGLTSFGEKVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQLLKKNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQGLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSPVEAEF---PY---------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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