Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660 680
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSCHHHHCCCCCCSSSCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC MEWGYLLEVTSLLAALALLQRSSGAAAASAKELACQEITVPLCKGIGYNYTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYKKPLPPCRSVCERAKAGCAPLMRQYGFAWPDRMRCDRLPEQGNPDTLCMDYNRTDLTTAAPSPPRRLPPPPPGEQPPSGSGHGRPPGARPPHRGGGRGGGGGDAAAPPARGGGGGGKARPPGGGAAPCEPGCQCRAPMVSVSSERHPLYNRVKTGQIANCALPCHNPFFSQDERAFTVFWIGLWSVLCFVSTFATVSTFLIDMERFKYPERPIIFLSACYLFVSVGYLVRLVAGHEKVACSGGAPGAGGAGGAGGAAAGAGAAGAGAGGPGGRGEYEELGAVEQHVRYETTGPALCTVVFLLVYFFGMASSIWWVILSLTWFLAAGMKWGNEAIAGYSQYFHLAAWLVPSVKSIAVLALSSVDGDPVAGICYVGNQSLDNLRGFVLAPLVIYLFIGTMFLLAGFVSLFRIRSVIKQQDGPTKTHKLEKLMIRLGLFTVLYTVPAAVVVACLFYEQHNRPRWEATHNCPCLRDLQPDQARRPDYAVFMLKYFMCLVVGITSGVWVWSGKTLESWRSLCTRCCWASKGAAVGGGAGATAAGGGGGPGGGGGGGPGGGGGPGGGGGSLYSDVSTGLTWRSGTASSVSYPKQMPLSQV |
1 | 5l7dA | 0.24 | 0.13 | 4.09 | 0.83 | DEthreader | | ---LWGIVERERGWPDFLRCTPDRFPE-GCTN---------------------EVQNI-------------------------------------------------------------------------KF---N--------------------------------------------------------------------S-SGQ----------------------CEVP-LVRT----DNPKSWY-EDVEGCGIQC-QNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRNSRYPAVILFYVNACFFVGSIGWLAQFMGARREIVCR----AD-----------------------------------GTMRLGEPTETLSCVIIFVIVYYALMAGFVWFVVLTYAWHTS-FKALQ--PLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSARRQLALERARSTLSKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRYVQAVIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVW-T--KATLLIWRRTWCR-----------------------------------------------------------------LT----- |
2 | 5l7dA | 0.28 | 0.19 | 5.74 | 3.64 | SPARKS-K | | ----------------------PPPLSHCGRAAPCEPLRYNVCLGLPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNARCWAVIQPLLCAVYMPKCENDR--VELPSRTLCQATRGPCAIVERER--GWPDFLRCTRFPEG------CTNEVQN-----------------------------------------------------------------------IKFNSSGQCEVPLVRTD------NPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWNSNRYPAVILFYVNACFFVGSIGWLAQFMDGRREIVCRADG-------------------------------------TMRLGEPTSNETLSCVIIFVIVYYALMAGFVWFVVLTYAWHTSFKAL---QPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSARRQLADLRARSTLSKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRVLCQPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLT------------------------------------------------------------------------- |
3 | 5l7dA | 0.25 | 0.17 | 5.19 | 1.11 | MapAlign | | ------------------------PLSHCGRAAPCEPLRYCLGSVLPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNARCWAVIQPLLCAVYMPKCEN--DRVELPSRTLCQATRGPC-AIVERERGWPD-FLRCPDRFPEG----CTNEVQNIKFNSSG------------------------------------------------------------------------QCEVPLVRTDNPKS------WYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADRNSNRYPAVILFYVNACFFVGSIGWLAQFGA-RREIVCRADG---------------------------------------TMRLGEPTETLSCVIIFVIVYYALMAGFVWFVVLTYAWHTSFKALQ---PLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTQIDDALKLANEGKVKEAQAAAEQLKRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSGLPTKQPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRL-------------------------------------------------------------------------- |
4 | 5l7dA | 0.26 | 0.18 | 5.51 | 0.75 | CEthreader | | ----------------------PPPLSHCGRAAPCEPLRYNVCLGLPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNARCWAVIQPLLCAVYMPKCEN--DRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDRFPEGCTNEVQNIKFNSSGQ-----------------------------------------------------------------------------CEVPLVRTDN------PKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADG------------------------------------TMRLGEPTSNETLSCVIIFVIVYYALMAGFVWFVVLTYAWHTSFKAL---QPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSARRQLADLRARSTLSKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDTKQPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLT------------------------------------------------------------------------- |
5 | 4jkvA | 0.24 | 0.16 | 4.85 | 2.01 | MUSTER | | ---------------------------GTADLEDNWE-------TLNDNLKVIEKADNAAQVKDALTKMRAAALDA-QKA-----------TPPKL----EDKSPDSPEMKDFRHGFDILVGQID-----DALKLANEGKVKEAQAAAEQLKTT-------------------------------------------------------------------RNAYIQKYLSGQCEVPLVRTDNPK------SWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRSNRYPAVILFYVNACFFVGSIGWLAQFMDGRREIVCRADGTMRLG-------------------------------------EPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKAGTTYQP--GKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQANCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWC---------------------------------------------------------------------------- |
6 | 5l7dA | 0.28 | 0.19 | 5.78 | 6.14 | HHsearch | | ----------------------PPPLSHCGRAAPCEPLRYNVCLGLPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNARCWAVIQPLLCAVYMPKCEND--RVELPSRTLCQATRGPCAIVER--ERGWPDFLRCTRFPEG------CTNEVQNI-----------------------------------------------------------------------KFNSSGQCEVPLVRTDNPK------SWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRSNRYPAVILFYVNACFFVGSIGWLAQFMDGRREIVCRADGTMR-------------------------------------LGEPTSNETLSCVIIFVIVYYALMAGFVWFVVLTYAWHTSFKAL---QPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSARRQLADPEGKSTLSKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRCQANVIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLT------------------------------------------------------------------------- |
7 | 5l7dA | 0.27 | 0.18 | 5.61 | 3.46 | FFAS-3D | | ----------------------------CGRAAPCEPLRYNVCLGLPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNARCWAVIQPLLCAVYMPKCENDR--VELPSRTLCQATRGPCAIVERE--RGWPDFLRC---------------------------------------------------------------------------TPDRFPEGCTNEVQNIKFNSSGQCEVPLVRTDNP------KSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWNSNRYPAVILFYVNACFFVGSIGWLAQFMDGRREIVCRADGTMRLG-------------------------------------EPTSNETLSCVIIFVIVYYALMAGFVWFVVLTYAWHTSF---KALQPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSARRQLADERARSTLSKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRL-------------------------------------------------------------------------- |
8 | 4jkvA | 0.23 | 0.14 | 4.52 | 1.02 | EigenThreader | | GTADLEDNWETLNDNLKVIEKADNAAQVKDALTKM------RAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANE----------------GKVKEAQAAAEQLKTTRNAYIQKYL-----------------------------------------------------------------------------------------------------SGQCEVPLVRTDNPKSWYDVGIQ---------CQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPT------------------------------------SNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTF----------HLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQANCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWC---------------------------------------------------------------------------- |
9 | 5l7dA | 0.28 | 0.18 | 5.64 | 2.79 | CNFpred | | -----------------------------GRAAPCEPLRYNVCLGSVLGATSTLLAGDSDSQEEAHGKLVLWSGLRNARCWAVIQPLLCAVYMPKCEND--RVELPSRTLCQATRGPCAIVERE--RGWPDFLRCTRFPE------GCTNEVQ-----------------------------------------------------------------------NIKFNSSGQCEVPLVRTDN------PKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRNSRYPAVILFYVNACFFVGSIGWLAQFMDARREIVCRADGTMR-------------------------------------LGEPTSNETLSCVIIFVIVYYALMAGFVWFVVLTYAWHTSFK-----QPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSARRQLADLE-RSTLSKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRVLCQA-PDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLT------------------------------------------------------------------------- |
10 | 4jkvA | 0.25 | 0.13 | 4.10 | 0.83 | DEthreader | | ---------------------------------------------------------------------------------------------------------------------------------TLNDNLKV--K-----------------D-N--------------------A-----------------------------DAQKATPPKL-D------Y-SGQCEVPLVRT----DNPKSWY-EDVEGCGIQCQ-NPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWNSNRYPAVILFYVNACFFVGSIGWLAQFMGARREIVCR----------------------------------------ADGTMRLGETETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALTTYQPGKTS-Y-FHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRYVCQANCE-I-KNRPSLLVEKINLFAMFGTGIAMSTWVW----TKATLLIWRRTW------------------------------------------------------------------C------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|