Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCSSSHHHHHHHHHHHHHHHHCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSSCCCCCSSSSSSSSCCCCCCCCCCCCSSSSSSCCCCCHHHHCHHHHHHHCCCSSSSSCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSSSCHHHHHHHHHHHHCCCCCSSSSSCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCSSSSC MCVICFVKALVRVFKIYLTASYTYPFRGWPVAFRWDDVRAVGRSSSHRALTCAAAAAGVWLLRDETLGGDALGRPPRGARSQAQCLLQQLRELPGQLASYALAHSLGRWLVYPGSVSLMTRALLPLLQQGQERLVERYHGRRAKLVACDGNEIDTMFMDRRQHPGSHVHGPRLVICCEGNAGFYEMGCLSAPLEAGYSVLGWNHPGFGSSTGVPFPQHDANAMDVVVEYALHRLHFPPAHLVVYGWSVGGFTATWATMTYPELGALVLDATFDDLVPLALKVMPHSWKGLVVRTVREHFNLNVAEQLCCYPGPVLLLR |
1 | 6hxaA | 0.10 | 0.09 | 3.38 | 1.26 | SPARKS-K | | -PNRISPELLATCGYMPRIFFLNSQYAPQVSHFPAGNLDLSSEEFWYEWMINWSKVGDSYINIANSAKSE-----------------VSHVRALRSAAACYHWAEF-----MYFSDRSRKIQLREYIRSCFLSSIKDLLVDHQYIVVD-KFHMPFFLIFPKGYKEEENHPLPCVILSNGLDSMEILSLAEFFLGKNMAVAIFDGPGQGINLGKSIAIDMELYVSSIVKLLEDDARINSNLLCFLGISFGGYFALRVAQRIDKFCCIVNLSGGPEIAEF--DKLPRRLKEDFQFAFNSHMQSIFDEISLPCKTKVFTVH |
2 | 5g59A | 0.17 | 0.11 | 3.50 | 1.53 | FFAS-3D | | -------------------------------------------------------------------------------------------------------HHHGYKMVNPPRVVGNWT-----------PKDLSFEYKDVEITTEDNVKLSGWWIDNG--------SDKTVIPLHGYTSSRWAPVIEFLLKEGYNVLAFDFRAHGKSGGKYTTVGEILDLKAGVKWLKDNYPEKSKRIGVIGFSMGALVAIRGLSEVKEICCGVADSPPIYLDKTGARGLPEWLYSFVKPFSELFSPINVLNYTNSIKKPLFLII |
3 | 2jbwA | 0.18 | 0.15 | 5.01 | 1.65 | CNFpred | | DNWGRLILDGVSYSDMVGARDRP---ITWFDY-----------------WMSLANEYEQEAERKVALG--------------------HDLSAGELLMSAALCAQYAQFLWFDERRQKGQARKVELYQKAAPLLS--PPAERHELVV-DGIPMPVYVRIPEG-----PGPHPAVIMLGGLESTKEFQMENLVLDRGMATATFDGPGQGEMFEKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPRLAACISWGGFSDL-DYWDLETPLTKESWKYVSARLHVHLETRDVLSQIACPTYILH |
4 | 6ii2A | 0.17 | 0.11 | 3.63 | 1.00 | DEthreader | | ----E--NV--------------------ES-L---------------------------------------------------------------SPLTRFLNN-E---LY-GEKDARRK-IGEITQTLLDH-AV--ESQKVTLKG-EVGRLTGYYHQGAAS------SGKVVLFLHGSSSAEESEIRNHYQKQGIDMLAVNLRGYGESDGGPSEKGLYQDARTMFNYLVNDKGIDPSNIIIHGYSMGGPIAADLARYAAAVSGLLLDRPMPSMTKAITAEVPAGIVGAIAKAVNG-Q-FSVEKNLKGLPTPILLLT |
5 | 3mveA | 0.09 | 0.08 | 3.25 | 1.24 | SPARKS-K | | SALTQYMPTSQSLLDEIKEKNGFSWYRN--------LRRLQWVWQGVDPIEQEQVLARIASSKHSRTDEQWLDTVMGYHSYEWTRLGMEHQKRASEALFSASLCYSIAGYPHLKSDN-LAIQAQVLANSAYLEAAKKSKIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQKIKACVILGAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVLSGQMAAWKVPILAMS |
6 | 3mveA | 0.09 | 0.08 | 3.16 | 0.45 | MapAlign | | -ALTQYMPTSQSLLDEIKEKNGFSWYRNLRRLQWV---WQGVDPIEQEQVLARIASSKHSRTDEQWLDTVMGYHSGNWAYEWTRLGMEHQTNEAASEALFSASLCYSIAGYPHLKSDNLAIQAQVLANSAYLEAAKKYIIKQLEIPF-EKGKITAHLHLTNT-----DKPHPVVIVSAGLDSLQTWRLFRHLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQKIKACVILGAPIHFPQKLQGKSVVDIYSLSGQMAA----WSLKGFLSKTKVPILAMS |
7 | 6agqA | 0.11 | 0.08 | 2.84 | 0.34 | CEthreader | | ----------------------------------------------------------------------------------------MPLSQLQDYKPELTNETDFDLFWDNAKALSNQKPLHAQVNLVQDYPLKSISIYDVVYDGADGTPIHGWYVTP--KGEHQPGSLPVLVKYHGYSGNRGYPELLQWASMGMAALAIDVRGQGGVTPDRAYKQVYLDCIRALDFVCSREEVDASRIAVYGGSQGGGLALAAAGLDSRPKLALPVFPFLCHFRRSVEIHASGPYVEIKNWFRRYDYFDGMNMASRIKARTLMAI |
8 | 6hxaA | 0.12 | 0.11 | 3.92 | 0.87 | MUSTER | | --PNRISPELLATCGYFMPRIFFLNSQYAPQ-VHWGDVVALSHFPAGNLDLSSEEFWYEWMINWSKVGDSYINIANSAKS---------EVSHVRALRSAAACYHWAEFMYFSD--RSRKIQLREYIRSCFLSSIKYSDLDHQYIVV-DKFHMPFFLIFPKGYKEEENHPLPCVILSNGLDSMTILSLAEFFLGKNMAVAIFDGPGQGINLGKSIAIDMELYVSSIVKLLEDDARINSNLLCFLGISFGGYFALRVAQRIGDFCCIVNLSGGPEIAE--FDKLPRRLKEDFQFAFMQDNS-HMQSIFDECKTKVFTVH |
9 | 6ii2A1 | 0.19 | 0.14 | 4.35 | 0.81 | HHsearch | | ---------------------------------------------------ENVAIEN-------------DGTPPRD-----KESLSPLTRFLNNELY-------G---------EKDARR--KIGEITQTLLDHAVESQKVTLKGEVG-RLTGYYHQGAA------SSGKVVLFLHGSGSSAEESEIRHYQKQGIDMLAVNLRGYGESDGGPSEKGLYQDARTMFNYLVNDKGIDPSNIIIHGYSMGGPIAADLARYGQAVSGLLLDRPMPSMTKAITAHEVAGIVGAIAKAVNGQ--FSVEKNLKGLPTPILLLT |
10 | 3mveA | 0.10 | 0.10 | 3.57 | 1.46 | FFAS-3D | | ------TSALTQPTSQSLLDEIKENGFSW---YRNRRLQWVWQGVDPIEQEQVLAR-----IASSKHSRTDEQWLDTVMGYHSGNWAYEWTRLGMEHQALFSASLCYSIAGYPLKSDNLAIQAQVLANSAYLEAAKKSKYKQLEIPF-EKGKITAHLHLTNTD-----KPHPVVIVSAGLDSLQTDMWRLFLAKHDIAMLTVDMPSVGYSSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEIKACVILGAPIHDIFASPQKLQQMIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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