Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCCSSCCCCCSSSSCCCHHHHHHHHHHHHHHCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCHHHHHHHHHHCCCCCCCCSSSSSSSSCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHCCCSSSSCCCCSSSSSCCCCCCSSSSSSSSCCCCCHHHHHHHHCC MANVLCNRARLVSYLPGFCSLVKRVVNPKAFSTAGSSGSDESHVAAAPPDICSRTVWPDETMGPFGPQDQRFQLPGNIGFDCHLNGTASQKKSLVHKTLPDVLAEPLSSERHEFVMAQYVNEFQGNDAPVEQEINSAETYFESARVECAIQTCPELLRKDFESLFPEVANGKLMILTVTQKTKNDMTVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIMKKLSGN |
1 | 5cuzA | 0.91 | 0.46 | 12.82 | 0.67 | DEthreader | | -----------------------------------------INS---------------------------------------------------------------------------------------------ET--ESARVECAIQTCPELLRKDFESLF-PE---KL-ILTVTQKTKNDTVWS-EEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLFSVDDL---CKVIRHSLWGTHVVVGSIFTNATPDSHI-KKLSG- |
2 | 5cuzA | 0.96 | 0.50 | 14.11 | 1.58 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------INSAETYFESARVECAIQTCPELLRKDFESLFPEK-----LILTVTQKTKND-TVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIKKLSG-- |
3 | 5cuzA | 0.97 | 0.50 | 14.11 | 1.39 | MapAlign | | --------------------------------------------------------------------------------------------------------------------------------------NSAETYFESARVECAIQTCPELLRKDFESLF----PEKL-ILTVTQKTKNDT-VWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIK-KLS-- |
4 | 5cuzA | 0.99 | 0.52 | 14.48 | 1.46 | CEthreader | | -------------------------------------------------------------------------------------------------------------------------------------INSAETYFESARVECAIQTCPELLRKDFESLFPEK-----LILTVTQKTKND-TVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHI-KKLSG- |
5 | 5cuzA | 0.98 | 0.51 | 14.39 | 1.34 | MUSTER | | -------------------------------------------------------------------------------------------------------------------------------------INSAETYFESARVECAIQTCPELLRKDFESLFPEK-----LILTVTQKTKND-TVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSH-IKKLSG- |
6 | 5cuzA | 0.99 | 0.52 | 14.48 | 6.89 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------INSAETYFESARVECAIQTCPELLRKDFESLFPEK-----LILTVTQKTKND-TVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHI-KKLSG- |
7 | 5cuzA | 0.97 | 0.51 | 14.21 | 1.90 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------INSAETYFESARVECAIQTCPELLRKDFESLFPEK-----LILTVTQKTKNDTV-WSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIKK-LSG- |
8 | 5cuzA | 0.81 | 0.42 | 11.83 | 0.88 | EigenThreader | | ------------------------------------------------------------------------------------------------------------------------------INSAETYF-------ESARVECAIQTCPELLRKDFES----LFPEKLILTVTQKTKNDTVWSE--EVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIKK----L |
9 | 5cuzA | 1.00 | 0.53 | 14.95 | 2.17 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------INSAETYFESARVECAIQTCPELLRKDFESLFPE----KLMILTVTQKTKNDMTVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIMKKLSG- |
10 | 1wygA | 0.06 | 0.04 | 1.88 | 0.67 | DEthreader | | PE------CGEGCGACTNCPGIVMFYILQGFRTKPEFKPLDP--GKQVSVASINSDFKQ--A--SRREDDA---------TVQKLGAGKLDPTFA--------QKD---PP--A--NV--QL--FQEVMGRPLPHLAANMQAGAVYCD-------VTSTRAHVTCAIIT---QEHFETNCTI--AVPKGEGEMELFVTVRVKRMGGGFGGK------------ETRSTVV-----------ST-A--------LALAAHKTGRPVRC------MLDEDMLGLHHTGPSTYKIPAFS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|