Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCSSCSCCCCCSSSCCCCCCCCCCCSSSCCCCSSSSSCCCCCCCCCCCCCCCCCHHHCSSSSSSCCCCCCCCCCCCCCSSSSSSCCCCSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSSSSSSCCHHHHHHHHHCCCCCC MSTVGLFHFPTPLTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWESSKKVH |
1 | 5w1hA | 0.04 | 0.03 | 1.49 | 0.83 | DEthreader | | -----------RHLSTFLKPTMLASNILNFLKD-LTYFYYISLFFCSRIVYYKKKTSQYQTK--------------------GIFDSDEQKNI-----------------KKFQEMKN----IVEFRDLMDYSEIADELQGQLINWIYLRERDLMNFQLGYHYACL |
2 | 3d5aX | 0.22 | 0.21 | 6.65 | 2.41 | SPARKS-K | | PGAYGTFKYESGVHRVQRVPVTETQGRIH---TSTATVAVLPKAEEEDF----ALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNFPQSRVTDHRIGFTTHD |
3 | 3d5aX | 0.21 | 0.20 | 6.51 | 0.97 | MapAlign | | MYLRFAEEMGFETEVLDSHPTDLGGFSKVVFEVRGHTSTATVAVLPKAEEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKTRLAQEGVLSGHLTPILEALKRADQERQLAAL---- |
4 | 1rq0A | 0.18 | 0.17 | 5.48 | 0.90 | CEthreader | | KNAYGILKYESGVHRVQRVPVTESGGR---IHTSTATVAVLPEIEEK----DIEIRPEDLKIETFRASG----YVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRARLYQLQKQNRVTDHRINYTSYRLQEILDGDLDEIISKLIEHDIENNLEEVL- |
5 | 3d5aX | 0.23 | 0.22 | 6.81 | 2.31 | MUSTER | | PGAYGTFKYESGVHRVQRVPV-TETQGRIHTSTATVAVLPK------AEEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKTRLAQIGTGERSEKIRTYNFPQSRVTDHRIG-FTTH |
6 | 3d5aX | 0.23 | 0.19 | 6.03 | 3.57 | HHsearch | | PGAYGTFKYESGVHRVQRVPVTE----TQGRIHTSTTVAVLPKAEEE----DFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEE--------------AERLRKT------RLAQ-IGTGERSEKI |
7 | 3d5aX | 0.24 | 0.20 | 6.19 | 1.65 | FFAS-3D | | -GAYGTFKYESGVHRVQRVPVTETQ-GRIHTSTATVAVLP------KAEEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLL-------------------EMKRAEEAERLRKTRLAQIGTGERSEK--- |
8 | 3d5aX | 0.21 | 0.19 | 6.14 | 1.08 | EigenThreader | | GAYGTFKYESGVH-RVQRVPVTETQG---RIHTSTATVAVLPKA----EEEDFALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKTRLAQIGTGERSPILEALKRADQERQLAALA--EG- |
9 | 2wh1Y | 0.26 | 0.20 | 6.31 | 1.97 | CNFpred | | ENAYGLLSPEAGVHRLVRPSPFDA----SGRRHTSFAGVEVIPEV--DEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSAVRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALRGEVE------------------------------ |
10 | 1gqeA | 0.18 | 0.13 | 4.33 | 0.83 | DEthreader | | RALKESSLEAVDT--GLDVLLEAVFAVELDALEEKLQLFRFSGEY---V-IDIEINPADLRIDVYRASG-GGQHNR-TESAVRITHIPTGIVTQCQNDRSQHKNKDQA-KQ-KAKLYEVEQNA----W---I---I--TNTQAVLD-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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