Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHSSCCCCCCCCCHHHHHHHHHHHHCCCCCCCSSSSCCHHHHHHHHHHHHHCCCCCC MSSSGSSHPFLLTGFPGLEEAHHWISVFFLFMYISILFGNGTLLLLIKEDHNLHEPMYFFLAMLAATDLGLALTTMPTVLGVLWLDHREIGSAACFSQAYFIHSLSFLESGILLAMAYDRFIAICNPLRYTSVLTNTRVVKIGLGVLMRGFVSVVPPIRPLYFFLYCHSHVLSHAFCLHQDVIKLACADTTFNRLYPAVLVVFIFVLDYLIIFISYVLILKTVLSIASREERAKALITCVSHICCVLVFYVTVIGLSLIHRFGKQVPHIVHLIMSYAYFLFPPLMNPITYSVKTKQIQNAILHLFTTHRIGT |
1 | 2ks9A | 0.15 | 0.14 | 4.83 | 1.33 | DEthreader | | ------TNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QPRLSATATKVVICVIWVLALLLAFPQGYYST-T-ET----PSRVVCMIE-WPE-H-PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWDRYHVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINLYFIQQVYLAIMWLA-MSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF-- |
2 | 4n6hA2 | 0.15 | 0.14 | 4.74 | 2.19 | SPARKS-K | | ---------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTL-PFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQF---------PSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG-- |
3 | 3dqbA | 0.13 | 0.13 | 4.41 | 0.61 | MapAlign | | NKTGVVRSPFEAPQYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCK--PMSNFFGENHAIMGVAFTWVMALACAAPPLVGW--SRYI--PEGMQCSC-------GIDYHEETNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN-- |
4 | 3dqbA | 0.14 | 0.13 | 4.52 | 0.36 | CEthreader | | KTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIP----EGMQCSCG---IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN-- |
5 | 5zbhA1 | 0.16 | 0.15 | 5.09 | 1.61 | MUSTER | | --DDCHLP----------LAMIFTLALAYGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPRGWRP--NNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPFQNVTLDAYKDKY-VCFDQFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKY--RSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQIIHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFCD--- |
6 | 6kp6A | 0.17 | 0.15 | 5.05 | 1.33 | HHsearch | | ------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKRT--VPDNQCFAQFL---------SNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSCIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ---- |
7 | 3emlA1 | 0.18 | 0.16 | 5.30 | 2.24 | FFAS-3D | | ---------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMN---------YMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFF--CPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ |
8 | 2ks9A | 0.14 | 0.14 | 4.69 | 0.97 | EigenThreader | | LSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHP--LQPRLSATATKVVICVIWVLALLLAFP------QGYYSTTETMPSRVVCMIEWPEHPNKIY--EKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFIS |
9 | 4ww3A | 0.18 | 0.16 | 5.24 | 1.73 | CNFpred | | ------------------DAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGV----LCNCSFDYIS-----RDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKE-AEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCC |
10 | 6me6A | 0.16 | 0.15 | 5.01 | 1.33 | DEthreader | | LMAELKTTNAQ-GDGARPSWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALANLVVAFYPYPLILVAIFYDGWAFGEEHCKASAFVMGLSVIGSVWNITAIAIDRYLYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLPNFFVGS-L--E---YDPRYSCTFI-QT------A--STQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLRMKKVECLKPSFLTMFVVFVIFAICFAPLNCIGLAVAPAPQIPEGLFVTSY-LLAYFNSCLNPIVYGLLDQNFRREYKRILLALWN-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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