Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCHHHHHCCCCC RDAGGSMTIHTFGAYFGLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHRTALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALAAGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAYGDGLESVFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPRLPALRGPSSLAGAWRA |
1 | 2nuuD | 0.23 | 0.20 | 6.17 | 1.33 | DEthreader | | VWLDAGGTVHINAAIAGLVGAYLIGKRVGF--G-KEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTNEIAALAFVNTVVATAAAILGWIFGEWALR--GKPSLLGACSGAIAGLVGVTPACGY-IGVGGALIIGVVAGLAGLWGVTMLKRLLR----VDDPCDVFGVHGVCGIVGCIMTGIFAASSL-GGV--GFAE--------GVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADVGLRVPEEQRE-------------- |
2 | 5aexA | 0.18 | 0.18 | 5.75 | 2.94 | SPARKS-K | | LDYAGGLCVHLTSGHGGLVYALILGKRNDPVRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATRAWYSIMSTNLAAACGGLTWMVIDYFRC-GRKWTTVGLCSGIIAGLVGITPAAG-FVPIWSAVVIGVVTGAGCNLAVDLK-----SLLRIDDGLDCYSIHGVGGCIGSVLTGIFAADYVNATAGSYISPIDGGWINHHYK---QVGYQLAGICAALAWTVTVTSILLLTMNALKLRLSADEEELGTDAAQIGEFTY |
3 | 2b2jA | 0.18 | 0.16 | 5.17 | 1.74 | MapAlign | | LDFAGGMVVHISSGFAALAVAMTIGKRAGFEEYSIE---PHSIPLTLIGAALLWFGWFGFNGGSAAANDVAINAVVVTNTSAAVAGFVWMVIGWI---KGKPGSLGIVSGAIAGLAAITPAAGF-VDVKGAIVIGLVAGIVCYLAM-DFRIK----KKIDESLDAWAIHGIGGLWGSVAVGILANPEV---------NGYAGL---LFGNPQLLVSQLIAVASTTAYAFLVTLILAKAVDAAVGLRVSSQEEYVGLDLSQ----- |
4 | 2nuuD | 0.23 | 0.21 | 6.63 | 1.23 | CEthreader | | LDFAGGTVVHINAAIAGLVGAYLIGKRVGFG---KEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGTAEIAALAFVNTVVATAAAILGWIFGEWAL--RGKPSLLGACSGAIAGLVGVTPACG-YIGVGGALIIGVVAGLAGLWGVTMLKRLLR----VDDPCDVFGVHGVCGIVGCIMTGIFAASSLGGVG-----------FAEGVTMGHQLLVQLESIAITIVWSGVVAFIGYKLADLVGLRVPEEQEREGLDVNSHGENAY |
5 | 3hd6A | 0.55 | 0.50 | 14.46 | 1.42 | MUSTER | | KDAGGSMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAASD--------------------WTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFW-GQPSDENCFEDA--VYWEMP |
6 | 6eu6A | 0.24 | 0.22 | 6.82 | 4.84 | HHsearch | | IDFAGATVVHSIGGWFAMAAAIMVGPRIDKYNPDSNRIGLHNVPLATLGTFFLWFGWFGFNGGSLLRVSNIGLVILNTNMAAASAGVSALIFIYA--TRKRIEAGSLFTAILAGLVAITASSN-MVTPVSAVAIGLITGILAIIAEGF----IEKTLKIDDPVSAIAVHGVGGVIGTLCVAIFAQKSYLL-----A---------ENGSRMHQLGIQALGVIVAFSWSFGLGMLFFLCLKKKRLRVTPEEEKRGLNVAEAA---- |
7 | 3hd6A | 0.56 | 0.50 | 14.44 | 2.50 | FFAS-3D | | -DAGGSMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAA--------------------SDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSDENCFEDAV-------- |
8 | 3hd6A | 0.55 | 0.50 | 14.46 | 1.82 | EigenThreader | | KDAGGSMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAAS--------------------DWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSDE-----NCFEDAVYWE |
9 | 3hd6A | 0.55 | 0.50 | 14.47 | 2.12 | CNFpred | | KDAGGSMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQHRAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAAS--------------------DWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSD-ENCFEDAVYWEMPEG |
10 | 6eu6A | 0.24 | 0.21 | 6.47 | 1.33 | DEthreader | | LDFAGATVVHSIGGWFAMAAAIMVGPRIKYNPDSSNRIGLHNVPLATLGTFFLWFGWFGFNGGSLLRVSNIGLVILNTNMAAASAGVSALIFIYATRK--RIEAGSLFTAILAGLVAITASSNM-VTPVSAVAIGLITGILAIIAEGFIEKTLK----IDDPVSAIAVHGVGGVIGTLCVAIFA--QK------S---YLLAE---NGSRMHQLGIQALGVIVAFSWSFGLGMLFFLCLKKRLRVTPEEEK-------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|