Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCSSCCCCCCCSSSSSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSCCCCCCSSSSSSSCC MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSADGTYMPPGFYPPPGPHPPMGYYPPGPYTPGPYPGPGGHTATVLVPSGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPSCKAYIYTYKRLC |
1 | 7jjvA | 0.15 | 0.09 | 2.93 | 1.08 | SPARKS-K | | ----MQCDGLDGADGNGQAGASGLAGGPNCNGGKGGKGAPGVGTAGGAGGVGGAGGTGNTNGGAGGSGGNSDVAAGGAGAAGGAAGGAGTGGTGGNGGAGKPGGAPGAGGAGTPAGSAGSPGQTTVL--------------------------------------------------------------------------------- |
2 | 1e07A | 0.06 | 0.06 | 2.56 | 1.53 | MapAlign | | VAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQTLHVIKSDLVNEEATGQRLQLSNGNRTLTLTISPLNTSYRSGENLNLSCHAASNPPAQYSWFTVNNSGSYTCQAHNSDTGLNRTTYLWWVNNQSLPVSPRLQLSNDRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNV |
3 | 6y22A | 0.11 | 0.09 | 3.12 | 0.79 | CEthreader | | -----------------------------------PEPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYSI---------PHGIQGPEHPNPGKPFTARGFPRQCYL-PDNAQGRKVLELLK |
4 | 5xamA1 | 0.05 | 0.05 | 2.28 | 0.63 | EigenThreader | | PWEHKNDPWSLWNDQYQFMTLGLDLKGGLRIELPGATQTARLEFNSDAKPDPAVREKNPRSSGYTLAQGTDQRSGQWVVNTTDAGAKTFGDFTGKNVLINQRLFRDIQISGNFVLKSGALPIKIVT----AAERSIGGATLTLPGIAGLVLTAAVDGNVISFERIKEELARGIKNAIGAGYEHSTAAILDVNTLIIGVIASTFSNLVF |
5 | 2rdoL | 0.14 | 0.10 | 3.27 | 0.44 | FFAS-3D | | MRLNTLSPAEGSKKA---GKRLGRGIGSGLGKTGGRGHKGQ-------------KSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEV--TTPVTVRGLRVTKGARAAIEAAGG-------------------------------------------------- |
6 | 3jc8Pa | 0.14 | 0.11 | 3.60 | 0.92 | SPARKS-K | | CEEPPAPAPPPAKPKAAAAVPVKAAPTETGAQAAPSYSYV-------------YNPVGKRDP---FRSPIDELGPVNANPV----AACNEPLCSFDLDQLKVAVVTGDASPVAMVEDPAG--RGHIVRRNTRMGRQGGKVTQIL-RDSVTVTEVFSGNGEIIKNPVTLQLKPDAKQD------------------------------- |
7 | 2e5wA | 0.06 | 0.02 | 1.03 | 0.55 | CNFpred | | ---------------------------------------------------------------------------------------------------------------------------KIEVYETEG----FGKLLAI--DGTVQLVTEGEKSYHEPLVHPAMLAHPNPRRVLIIGGGDGGAIREVLKHEEVEEVIMVEIDKK |
8 | 6x99A | 0.06 | 0.04 | 1.91 | 0.67 | DEthreader | | EEAYAERADGLALPAELFGDAR----------------------------SRALDAELM-I-LRYA-CISPWNFP-IFQIPVLAKGVRLREAGIPSALQ-AAETAGVLSPIP-IA-------AVVGVGPPPQHSSLDLELPGP--VGERNLYTLHARGRILAVGALVEGAASSGEARNPDAYCLNWLVEEVSASINT----------- |
9 | 4yntA | 0.05 | 0.05 | 2.43 | 1.24 | MapAlign | | TSGLVVANRLSENPDVSVLLLEAGASVFNNPDVTNANGYGLAFGSAIDWQYQSINQSYAGGKQQVLRAGKALGGTSTINGMAYTRAEDEDVNGGKMRGFNIYPSTLDVDLNVREDAARAYYFPYDDRKNLHLLENTTANRLFAIADGVEISTVTYPIVASLRSQLSDYAAATRLYQLQFDLIVDKVPIAEILFHPGNAVSSEFWGLLP |
10 | 3ucpA5 | 0.08 | 0.07 | 2.62 | 0.60 | MUSTER | | ----------------VISEAK----GEKADFSASHALTHAADKPDNS----SAVPNTAVALADGSNGAPAHSKKPFERGFDFKVMIHQIHADTRSVRRLTTDAATFPENPADKGQLSLATLGNKPAFLASTGEYSPTVAACASC-----ATTATDSAVIGHFETNGGVYNA-----------AGTYTPGSETCATCSFGVDKVHPVK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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