Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCSCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCSCCCCCHHHCCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHHCCCC MSDSKEPRVQQLGLLEEDPTTSGIRLFPRDFQFQQIHGHKSSTGCLGHGALVLQLLSFMLLAGVLVAILVQVSKVPSSLSQEQSEQDAIYQNLTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTELKAAVGELPEKSKLQEIYQELTQLKAAVGELPDQSKQQQIYQELTDLKTAFERLCRH |
1 | 4u08A | 0.21 | 0.20 | 6.30 | 1.33 | DEthreader | | PKEIGQLQNLQELNL-NQLATL-DIQLRLTLYLG--HNQF-N---S-----ILKEIGQ-L-QNLESLGLNQLNVLPKEIGRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL |
2 | 4u08A | 0.22 | 0.21 | 6.75 | 2.36 | SPARKS-K | | EALKNPQNVRILNLSGSKLTTLPGLQNLQLLNLDDNQLIA-----LPKEIGKLQNLEIGQLQNLQKLKLYQLTAIPKEIGQLQNELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRL |
3 | 5hyxB | 0.14 | 0.13 | 4.60 | 0.58 | MapAlign | | -KCNRRGEVSEIQLKE-KQLQGSLLKSLTSLTLSS-----LQLTGVIPKEIGDFTFRLKKLKTLSLNTNNLEGHIPMEIGSGLVELMLFDNKLSEIPRSIGELKNLQVLRAGGNNLRGLPWEIGNCENLVMLGLAETSLSGLPASIGNLKRVQTIAIYTSLLSGIPDEIGYCTELQNLYLYQNSISGIPTTIGGLKKLQSLLLWQNNLVGIPTELGNCPELWLIDFSENLLTGIPRSFGKLENLQELQLSVNQISGIPEELTNC--- |
4 | 4u08A | 0.22 | 0.21 | 6.72 | 0.36 | CEthreader | | EEIGQLQNLQKLKLYENQPKEIGQLQNLQELNLAHNQLAT-----LPEDIEQLQRLQTLYLGH------NQFNSILKEIGQLQESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKL |
5 | 4u08A | 0.21 | 0.21 | 6.66 | 1.78 | MUSTER | | LSKNQLQNLQKLKLYENQLTA-GQLQNLQELNLAHNQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNSLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNK |
6 | 6m04A | 0.14 | 0.13 | 4.51 | 0.92 | HHsearch | | AWVYLLKNLRELYLIGN-LNSLRELRHLKILHVKSN-LTKGTKLLVLNSLKKMMNVAELELQNCE------LERIPHAIFSLSNELDLKSNNIRTIEESFQHLKRLTCLKLWHNKIVTIPPSITHVKNLESLYFSNNKLESLPVAVFSLQKLRCLDVSYNNISMIPIEIGLLQNLQHLHITGNKVDILPKQLFKCIKLRTLNLGQNCITSLPEKVGQLSQLTQLELKGNCFDRLPAQLGQCRMLKKSGVVEDHLDTLPLEVKEALNQ |
7 | 4u09A2 | 0.20 | 0.13 | 4.21 | 1.73 | FFAS-3D | | ---------------------------------------------------------------------------------------LTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPISPEKERIRKLLP- |
8 | 6g9lA | 0.11 | 0.10 | 3.79 | 0.88 | EigenThreader | | ALAFLRENLRALHIIKEIPLWIYSLKTLEELHLNLSAENNRYIVI----------DGLRELKRLKVLRSNLSKLPVTDVGVHLQKLSINEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEIDLKDNNLKTIIISFQHLHRLTCLKLWYNHIAYIPIQIGNLTNLERLYLNRNKIEKIPTQLFYCRKLRYLDLSHNNLTFLPADIGLLQNLQNLAVTANRIEALPPELFQCRKLRALHLGNNVLQSLPSRVGELTNL |
9 | 4u08A | 0.21 | 0.21 | 6.52 | 7.82 | CNFpred | | KEIGQLQNLQELNLAHNQLATIEQLQRLQTLYLGHNQFN-----SILKEIGQLQNLESLGLDH------NQLNVLPKEIGQLLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL |
10 | 4lxrA | 0.12 | 0.12 | 4.07 | 1.33 | DEthreader | | PSHLFD-LELESIEFNKLR----IFGKMLKQLNLW-S--N-Q--L-H--N-LTKHDFEGA-TSVLGIDIHNIEQLPHDFATNVTDINLSANLFRSLPQGLFDNKHLNEVRLMNNVLATLPSRFANQPELQILRLR-AELQSLPGDLFESTQITNISLGDNLLKTLPATLLEQVNLLSLDLSNNRLTHLPDLFAHTTNLTDLRLEDNLLTGISDIFSNLGNLVTLVMSRNRLRTIDRAFVSTNGLRHLHLDHNDIDLQNSPFGYMHTM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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