Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCHHHHHHHHHHHHHHHHCHCHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCCSSSSSSSCCCCCCSSSCCCCCCCCCCCHHHHHHHHHHHHHCCCCSSSSSCCCCSSSSSSSCCCCCCCCCCCCSSSSSSSSSSSCCCCCCCCCCCCSSSCCHHHHHHHCCHHHHHHHHHHHHCC MAAPVRRTLLGVAGGWRRFERLWAGSLSSRSLALAAAPSSNGSPWRLLGALCLQRPPVVSKPLGARITEADEKNDRTSLNRKLDRNLVLLVREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGHHVWVTKDELGDYLKPKYLAQVRRFVSDL |
1 | 4v1aj1 | 0.80 | 0.53 | 14.87 | 0.83 | DEthreader | | -------------------------------------------------------------PLVTKRLTEADKDDRTSLHRKLDRNLILLVREKLGDQDIWMLPQSDWQPGETLRQTAERTLATLSENNMEAKFLGNAPCGHYKFK---------FLGAKVFFFKALLLTGDFSAGKK-GHHVWVSKEELGDYLKPKYLAQVRRFLLDL |
2 | 4v1aj1 | 0.87 | 0.66 | 18.58 | 1.76 | SPARKS-K | | ------------------------------------------SPWRLLGALCLQRPPLVTKPLGARLTEADKKDDRTSLHRKLDRNLILLVREKLGDQDIWMLPQSDWQPGETLRQTAERTLATLSENNMEAKFLGNAPCGHYKFK---------FLGAKVFFFKALLLTGDFSQAGKKGHHVWVSKEELGDYLKPKYLAQVRRFLLDL |
3 | 3dupA | 0.09 | 0.08 | 2.96 | 0.71 | MapAlign | | -----PQSRTRAVADVVDRLADEGVVPAPRGELYRVNQSWGEPTLLLDRAVVPTFGVRAYGVHLNG------------YVGAGADLHLWIGRRSSVAPGKLDNVAGGQPADLSLRQNLIKECAEEADLPEALARQA-IPVGAITYCE----SPAGIKPDTLFLYDLALPEDFPHNTDGEADF-LWPAAKVVEAFKFNVNLTVIDFAIRH |
4 | 4v1aj | 0.61 | 0.59 | 16.85 | 0.49 | CEthreader | | TKPLTPLQEEMADLLQQIEIERSLYSDHELRALDEAQQLAKKKSDLAQDLEDMWEQKFLHFKLGARLTEADKKDDRTSLHRKLDRNLILLVREKLGDQDIWMLPQSDWQPGETLRQTAERTLATLSENNMEAKFLGNAPCGHYKFKF---------LGAKVFFFKALLLTGDFSQAGKKGHHVWVSKEELGDYLKPKYLAQVRRFLLDL |
5 | 4v1aj1 | 0.88 | 0.67 | 18.71 | 1.66 | MUSTER | | ------------------------------------------SPWRLLGALCLQRPPLVTKPLGARLTEADKKDDRTSLHRKLDRNLILLVREKLGDQDIWMLPQSDWQPGETLRQTAERTLATLSENNMEAKFLGNAPCGHYKFKF---------LGAKVFFFKALLLTGDFSQAGKKGHHVWVSKEELGDYLKPKYLAQVRRFLLDL |
6 | 4v1aj | 0.88 | 0.67 | 18.71 | 1.71 | HHsearch | | ------------------------------------------SPWRLLGALCLQRPPLVTKPLGARLTEADKKDDRTSLHRKLDRNLILLVREKLGDQDIWMLPQSDWQPGETLRQTAERTLATLSENNMEAKFLGNAPCGHYKFKF---------LGAKVFFFKALLLTGDFSQAGKKGHHVWVSKEELGDYLKPKYLAQVRRFLLDL |
7 | 4v1aj1 | 0.87 | 0.66 | 18.45 | 2.20 | FFAS-3D | | ------------------------------------------SPWRLLGALCLQRPPLVTKPLGARLTEADKKDDRTSLHRKLDRNLILLVREKLGDQDIWMLPQSDWQPGETLRQTAERTLATLSENNMEAKFLGNAPCGHYKF---------KFLGAKVFFFKALLLTGDFSQAGKKGHHVWVSKEELGDYLKPKYLAQVRRFLLDL |
8 | 5mrc6 | 0.22 | 0.20 | 6.19 | 1.23 | EigenThreader | | SELNELEKKYYEYQSELEKRLMWTFPAYFYFKKGPISKKFPRGIPDIKHG-----RERSTKQEVKRITEADRSNDMKSLERQLSRTLYLLVKD--KSGTWKF-PNFDLSESKPLHVHAENELKLLSGDQIYTWSVSATPIGVLQDE---------RNRTAEFIVKSHILAGKFDLA--FEDFAWLTKGEISEYVPKDYFNKTEFL---L |
9 | 4v1aj | 0.88 | 0.58 | 16.29 | 1.91 | CNFpred | | --------------------------------------------------------------LGARLTEADKKDDRTSLHRKLDRNLILLVREKLGDQDIWMLPQSDWQPGETLRQTAERTLATLSENNMEAKFLGNAPCGHYKFKF---------LGAKVFFFKALLLTGDFSQAGKKGHHVWVSKEELGDYLKPKYLAQVRRFLLDL |
10 | 4v1aj | 0.80 | 0.53 | 14.87 | 0.83 | DEthreader | | -------------------------------------------------------------PLVTKRLTEADKDDRTSLHRKLDRNLILLVREKLGDQDIWMLPQSDWQPGETLRQTAERTLATLSENNMEAKFLGNAPCGHYKFK---------FLGAKVFFFKALLLTGDFSAGKK-GHHVWVSKEELGDYLKPKYLAQVRRFLLDL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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