Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
| | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CSSSSCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCSCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC AIVTIDGFSLFQSLRACRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTAIPDLLHLAYEQFPCSLELDVLHAHCCWEYVVQWNKDPEEARFFVRSIEHLKQIFNAHVQNGIALMMWNTFLVKRFSAATYLMDKVGKSPKDRLCRRDVGMSDTAMTSFLGSCLDLLQILMEADVSRDEIQVPVLDTEDAWLSVEGPISIVELALEQKHIHYPLVEHHSILCSILYAVMRFSLKTVKPLSLFDSKGKNAFFKDLTSIQLLPSGEMDPNFISVRQQFLLKVVSAAVQAQHSATKVKDPTEEATPTPFGKDQDWPALAVDLAHHLQVSEDVVRRHYVGELYNYGVDHLGEEAILQVHDKEVLASQLLVLTGQRLAHALLHTQTKEGMELLARLPPTLCTWLKAMDPQDLQNTEVPIATTAKLVNKVIELLPEKHGQYGLALHLIEAVEAISLPSL |
1 | 2ooeA | 0.09 | 0.08 | 3.09 | 1.10 | FFAS-3D | | ---------MAE--KKLEEILIREAQNQP------------------IDKARKTYERLVAQFPSSGR--------FWKLYIEAEIKAKNYDKVEKLFQCLMKVLHIDLWKCYLSYIWVDYINQRITAVRRVYQRGCVNPNIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPPPQPQEAQQVDMWKKLRTEDQAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDE-AANIY-----ERAISTLLKKNMLLYFAYADYEESRYEKVHSIYNRLLAIEDIDPTLVYIQYAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVELGLKKYGDIPEYVLAYIDYTRVLFERVLTSGSPPEKSGEI---WARFLAFESNIG---------DLASILKVEKRRFTAFREEYEGKETALLVDSELKALGYKDV |
2 | 5tqcA | 0.11 | 0.09 | 3.10 | 1.19 | CNFpred | | ---------VRSITCWTLSRYAHWVVSQ-----------------PPDTYLKPLMTELLKRILD--SNKRVQEAACSAFATLEEEACTLVPYLAYILDTLVFAFLLILYDAIGTLADSV-IQMLMPPLIQKWNMLKD-------------EDKDLFPLLECLSSVATALQSGF----------PYCEPVYQRC---VNLVQKTLAQAAPDKDFMIVALDLLSGLAEGLGG------IEQLVASNILTLMYQCMQ--------DKMPEVRQSSFALLGDLTKACFQHVKP--------------------CIADFMPILGTNLNPEFISVCNNATWAIGEIS-IPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCP-QEVAPMLQQFIRPWCTSLRNIR---------DNEEKDSAFRGICTMIS--VNPSGVIQDFIFFCDAVASWIN |
3 | 1vt4I | 0.14 | 0.12 | 4.18 | 1.01 | HHsearch | | -----MDFETGEHQYQYKDILSVFEDAMPKSILSKEEIDHLLSKQEEEEKFLMSPIKTEQRQPS------MMTRMYIEQRDRYNDNVSRLPYLKLRQALLELRPAVWVALDVCLKVPET-VLEMLQKLLYQIDPNWTSRSDHSSN---------IKLRIHSIQAELRRLLKSKPYEQNLSTTRFKQVTDFLSATTPKSLLLKYLDCRPQDLPRTTNPRRLSIIAESIRDGLAKHVNCLTVLEPAEYRKMFDRLSVFPHIPTILWFDV-IKSDVM----VVVNKLHKYSLVE--KQPKES----TISIPSIYLELKVKLENEYALHRSIVDHYNIPK--TFDSD----DLIPPYLDQ---------YFYSHIGHHLKNIEHPERMTLMVFLDFRFLEQKIR-HDSTAWNASGSILNTLQQLKFYKPYICDNDPKERLVNAILDFLPKIEENLI |
4 | 5oqnA | 0.09 | 0.08 | 3.16 | 0.66 | CEthreader | | RYHHNQSHFDYNTLEFIIEQLSIAAERYDYRSMLTVVRNMLALTTLSEPLIKIGIRVMKSLSINEKDFVTMAIEIINDIRDDDIESATIVLCLTRSSYMLELVNTPLTENILIASLMDTLITPAVRNTAPNIRELGVKNLGLCCLLDVKLAIDNMYILGMCVSKGNASLKYIALQV--IVDIFSVHGNTVVDGEGKVDSISLHKIFYKVLKNNGLPECQVIAAEGLCKLFLADVFTDDDLFETLVLSYFSPINSSNEALCIPVYCFSHPAHQQRMSRTAADILLRLCVLDDLQSSVIPEVDREAMLKPNIIFQQLLFWTDPRNLVQLTFLIDVLKIYAQIEKKEIKKMIITNINSSEQDYSTLKELLEYSDDIAENDNLDNVSKNALDKLRNNLNSLIEEINER------------------------------------------------ |
5 | 3tj1A | 0.06 | 0.04 | 1.97 | 0.87 | EigenThreader | | VFSAAMYSRFVKSALDDLDKIANQVALPSKNPERILIQSIINFEKWWELPPHTLSKYIYFIKILCSSIPKWWQDVSMILVSCFILPIKQTVCHHDMLKYFLRMI-PSSMGFIDTYLAKFFTRRKLVNYTSNLLK---------LRGYCSELGFQIWSLLIEKIISIDVELQNELDELDT--------------------------QGIKELSTKLDSILTLVSTHVEEQVTPESLESGE---------------------------------GVGVFNTLTTLFKTH--------------VLPTYYTRSIQYIMFHVSQQQLELMDSFLVTLIDISFAIKSLQYLGSYIARALSRTQIIFVASYLTSWLNRYVI--------EREEEVDQR--------GGMERFKHFYAAFQALCYIFCFRHNIFRDDGNWECELDKFFQRMVIS--KFN |
6 | 4f52E | 0.10 | 0.09 | 3.19 | 1.09 | FFAS-3D | | --MAVE--ELQSIIKRCQLAGQRCIEEGHTD-QLLEIIQNEKNKVIIKNMGWNLVGPVVRCLKDKEDSKRKVYFLIFDLLVK-LCNPKEL--LLGLLELIEEPSGKQISQSILLLLQAYSIGLALSTLWNQLSLLPVPYSKM--------DDYGLCQCCKALIEFTKPFVEEVIDNKENSLENEKLKDELLKF--CFKSLKCPLLTAQFFDPFRYFASEIIGFLSAIGHPFPKMKQLADSMASLAYLVFVQGIHID-QLPMVLSPLYLLQFNMGHIEVFLQRTEESV------------------------ISKGLELLENSSLLYQYLEIKSFLTVPQ-----GLVKVMTLCPIETKKSLAMLQLYINKFRCLLNTSNHSGVEAF-------IIQNIKNQIDMSLKRKWFTGPQLISLLDLVLF-LPEGAQNSDRIMASLNLLRYL----- |
7 | 3gjxA | 0.11 | 0.10 | 3.64 | 0.83 | SPARKS-K | | VGASRTSESLCQNNMVILKLLSEEVF-DFSSGQITQVKAKHLKDCNEFSQIFQLCQFVMENS-----QNAPLVHATLETLLRFLNPLGYIFLISTLIYKF--LNVRNVSLKCLTEIAGVQFETLFTLTMMQLKQMLPLNTRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRL-------------NLREALMEALHYMLLVSEVETEIFKICLEYWNHLAAELYRES---------PFSTSA------SPLLSGSQHFDIPPRRQLYLTVLSKVRLLMVSRMAKPEEVLVVENDEFMKDTDSINLYKNMRETLVYLTHLDYVDTEIIMTKKLQNQVWSNTLCWAIGSISGAEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIGQYPRFLRAH-----------WKFLKTVVNKLFEFMHETHDQDMACDTFIKIAQKFVQVQV |
8 | 5vchA | 0.13 | 0.10 | 3.53 | 1.19 | CNFpred | | ------------KIRETAIFIILSLLES----FNANLAL----------HIDDFLNLFAQTINDS-LETRSLSAQALSYVSSLIINPQYAAKFASLIPSVVQV-DTTNTKLIFNCLNDFLIADLVKLALQIAVNS-------------DVDEDIRVFAVQFVTSALVYRKSKI-----------NQAKLGPEI--TLAALKVASEE--DVEDELTN-TPALTALRLISNA------SGELSPSQVGVPIIEHLPTMLSS----SNPFERRSILLAISVLVTGSPDYTLS--------------------QFDKIIPATVTGLKDSEAVVQLAALKCIVQLSVARYHEQYLPLVIDIIAKHVVIYKYATLALDGLLEFIAHNDIIKYLDPLMNKLFQMLETQQSPKL------RAAIVSAIGSCAFAAGS-----GFVPYFKTSVQYLQQFIQ |
9 | 4fgvA | 0.05 | 0.04 | 1.70 | 0.83 | DEthreader | | ---------------H---C--NMIILRLSEVFLKSTMCAE-FS--MIFQLC-E------------IPLGYIFTLIDTLRTFLEVFRNVLQCLTEIGGLQTGGPGQHTYDEQLIKMFTEVLTTISNIIPLQMD-LKATYPNS--N---SRDQEFIQNLALFLTSFFTMHLPLIE---------------------------------NLPNRDFLTHGHFYLIRISQIDDR-I---------------------------EH------YKEVLSNLRVVMIEKMVRPV-IVENDEGEIVEVKDSVQLYKTIRECLVYLTHLDVVDMEQIMTEKLQWHNCNVLCWAIGSISMAMNTEKRFLVTVIKDLLGLTEMK-RGK----------------------------DNKAVVASNIMYIVGQYPRFLKA---HWKFLKTVVNKLFEFMIGKI |
10 | 5vchA | 0.09 | 0.09 | 3.31 | 0.95 | MapAlign | | --EDIRVFAVQFVTSALVYRKSKINQAKLGEEIDVEDELTNEDENTPALTALRLISNASGELSPQVGNPFERRSILLAISVLVTGSPDTFDKIIPATVTGLKDSEAVVQLAALKCIV-QLSTNLEQYLPLVIDIIKHVVIYKYATLALDLQSPKLRAAIVSAIGSCAFAAGSSAAFAEYAEPLVAAYEAIKTDSARLRSGYAFIANAKVYEKEVAAAALLKVLAEQVNESGLKETALWAIV-KAVLLTANLKEGEYPKGVPSYVDASALAVIQTVLDQLCREALSVLK-GEHACQTILDASETEATLLDVALDIYVALSTNLVGGFAQVFTTAILQLCSKNKRSFAVGALSEIALGRDENPF-IQELLEALIISLTNDKSLEVRCNA--S-YGVGLLIEYSDVSAISPVLKSLYEILSVADEKNLATEDDEATKEIVDRTFSNVCGCVAR-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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