Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCSSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCSSSSCCHHHHHHHHHHHHHCCCCC MPTFNGSVFMPSAFILIGIPGLESVQCWIGIPFSAMYLIGVIGNSLILVIIKYENSLHIPMYIFLAMLAATDIALNTCILPKMLGIFWFHLPEISFDACLFQMWLIHSFQAIESGILLAMALDRYVAICIPLRHATIFSQQFLTHIGLGVTLRAAILIIPSLGLIKCCLKHYRTTVISHSYCEHMAIVKLATEDIRVNKIYGLFVAFAILGFDIIFITLSYVQIFITVFQLPQKEARFKAFNTCIAHICVFLQFYLLAFFSFFTHRFGSHIPPYIHILLSNLYLLVPPFLNPIVYGVKTKQIRDHIVKVFFFKKVT |
1 | 6me6A | 0.15 | 0.14 | 4.79 | 1.50 | DEthreader | | IVKLQIAQLKTTNAQKGDGARPSWVAPALSAVLIVTTAVDVVGNLLVILSVLRNRKLRNAGNLFLVSLALANLVVAFYPYPLILVAIFYDGWAFGEEHCKASAFVMGLSVIGSVWNITAIAIDRYLYICHSMAYHRIYRRWHTPLHICLIWLLTVVALLPNFFVGSL-E--Y----DPRYSCTFI-QT------A--STQYTAAVVVIHFLLPIAVVSFCYLRIWVLVLRMKKVLKDLRSFLTMFVVFVIFAICFAPLNCIGLAVANPMPQIPEGLFVTSYLLAYFNSCLNPIVYGLLDQNFRREYKRILLALWN- |
2 | 4n6hA2 | 0.13 | 0.12 | 4.17 | 2.10 | SPARKS-K | | -------------SPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATST-LPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMA-VTRPRDGAVVCMLQF---------PSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG- |
3 | 3dqbA | 0.16 | 0.15 | 5.06 | 0.61 | MapAlign | | PFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCK--PMSNFFGENHAIMGVAFTWVMALACAAPPLWSRYIPE-------GMQCSCGI--DYYTPHEET-NNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKSATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
4 | 3dqbA | 0.16 | 0.16 | 5.16 | 0.34 | CEthreader | | PFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEG-----MQCSC---GIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAATQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN- |
5 | 2rh1A1 | 0.19 | 0.17 | 5.41 | 1.56 | MUSTER | | ---------------------DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMH-----WYRATHQEAINCYAEE----TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKR--QLLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCL---- |
6 | 6kp6A | 0.15 | 0.13 | 4.39 | 1.33 | HHsearch | | ----------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVV-GK--RTVPDNQCFAQFL---------SNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSCIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRHLLLCQ--- |
7 | 3emlA1 | 0.17 | 0.15 | 4.89 | 2.10 | FFAS-3D | | -------------------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPML-GWNNCGQSQGCGEGQVACLFEDVVPMN---------YMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLVHAAKSLAIIVGLFALCWLPLHIINCFTFFCP--DCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR |
8 | 2ks9A | 0.15 | 0.15 | 4.90 | 0.97 | EigenThreader | | VDSDLSPNISTNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHP--LQPRLSATATKVVICVIWVLALLLAFPQ-----GYYSTTETMPSRVVCMIEWPEH----PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFI |
9 | 4ww3A | 0.18 | 0.16 | 5.25 | 1.72 | CNFpred | | -----------------------AVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE-----GVLCNCSFDYISRD-----STTRSNILCMFILGFFGPILIIFFCYFNIVMSVSN-AGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTC |
10 | 2ks9A | 0.16 | 0.15 | 5.03 | 1.33 | DEthreader | | ----------TNTSEPNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPL--QPRLSATATKVVICVIWVLALLLAFPQGYYST-TE--T---MPSRVVCMIE-WPE--HPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWSDRYVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPYLFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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