Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSSSSCCCSSSSSSSCCCCCCCSSSSSSCCCCCSSSSSSSSSSSSSSCCSSSSSSCCSSSSSSCCCCSSSSSSCCCSSSSSSSSCCSSSSCCCSSSSSSCCCCCSSSSSSSCCCCCCCCCCSSSSSSSCCCCCSSSSSSSSSCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCSSSSSCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSSSSCCCCCCCCSSSSSCCCSCCCCCCCCCCCC MNGEEEFFDAVTGFDSDNSSGEFSEANQKVTGMIDLDTSKNNRIGKTGERPSQENGIQKHRTSLPAPMFSRSDFSVWTILKKCVGLELSKITMPIAFNEPLSFLQRITEYMEHVYLIHRASCQPQPLERMQSVAAFAVSAVASQWERTGKPFNPLLGETYELIREDLGFRFISEQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCVLHFKPCGLFGKELHKVEGHIQDKNKKKLFMIYGKWTECLWGIDPVSYESFKKQERRGDHLRKAKLDEDSGKADSDVADDVPVAQETVQVIPGSKLLWRINTRPPNSAQMYNFTSFTVSLNELETGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREARRERAKEEAEWQTRWFYPGNNPYTGTPDWLYAGDYFERNFSDCPDIY |
1 | 5h2dA | 0.35 | 0.28 | 8.47 | 1.17 | DEthreader | | --------------------------------------QKTKAK-------FLGYEDKLRQRLKLGKDDR-PSVSLWSVLK-SMVGKDTRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTVKRVAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTES--PKWDFFGESFVDSKFNGRSFDFKHLGLWYLTIRPKEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNHNTGDYCMIHFKARGS----AYEVKGEVYNAKGGKEWIFGGRWNESVSAKKVLKPNS-E-------------------------------QVTSSGKDGTRFNVWHVNER-PEF--PFNLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHPVTKCDYWKFNGEYWKQKLADEGDIF |
2 | 5h2dA | 0.35 | 0.30 | 8.84 | 6.00 | SPARKS-K | | ---------------STAEQKTKAKVLLEEGSFLGYED--------------------KLRQRLKLGKDDRPSVSLWSVLKSMVGKDMTRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTVKRVAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTES--PKWDFFGESFVDSKFNGRSFDFKHLGLWYLTIRGKEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNHNTGDYCMIHFKAR----GSAYEVKGEVYNAKGGKEWIFGGRWNESVSAKKVL--------------------KPNSLEEMQVTSSGGPKYD------GTRFNVWHVNERPE---FPFNLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHPVTKCDYWKFNGEYWDHKLADEGDIF |
3 | 5h2dA | 0.35 | 0.30 | 8.82 | 2.21 | MapAlign | | -------------------------------------------AKVLLEEGSFLGYEDKLRQRLKLGKDDRPSVSLWSVLKSMVGKDMTRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTVKRVAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTESP--KWDFFGESFVDSKFNGRSFDFKHLGLWYLTIRDKEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNHNTGDYCMIHFKARGS----AYEVKGEVYNAKGGKEWIFGGRWNESVSAKKV--------------------------LKPNSLEEMQVTSSGGPKYDGTRFNVWHVNERP---EFPFNLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHPVTKCDYWKFNGEYRRHKLADEGDIF |
4 | 5h2dA | 0.35 | 0.30 | 8.84 | 1.48 | CEthreader | | -----------------------------------STAEQKTKAKVLLEEGSFLGYEDKLRQRLKLGKDDRPSVSLWSVLKSMVGKDMTRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTVKRVAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTES--PKWDFFGESFVDSKFNGRSFDFKHLGLWYLTIRPDEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNHNTGDYCMIHFKARG----SAYEVKGEVYNAKGGKEWIFGGRWNESVSAKKVLKPN--------------------------SLEEMQVTSSGGPKYDGTRFNVWHVNERPEF---PFNLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHPVTKCDYWKFNGEYWKQKLADEGDIF |
5 | 5zm5A | 0.74 | 0.61 | 17.19 | 3.33 | MUSTER | | -----------------------------------------------------------MRTSLPSPMFSRNDFSIWSILRK-IGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNP-TCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKP-GLFGKELHKVEGYIQDKSKKKL-ALYGKWTE-LYSVDPATFDAYKKNEMP------------------------VPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY |
6 | 4ic4A | 0.37 | 0.28 | 8.18 | 6.70 | HHsearch | | -------------------------------------------------------KSVTRRNDIPEAA--ASPPSLLSFLRKNVGKDLSSIAMPVTSNEPISILQLISETFEYAPLLTKAT---QRPDPITFVSAFAISFLSIYRDTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEH--LDWECSYTVTPSQKFWGKSIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVNEFEVH-SSKGDKSHILFDKAGMFSGRSEGFKVSIIPPPSSRKKELAGKWTQSLANET------------------------------------------------THETIWEVGDLVSNPKKKYGFTKFTANLNEITEIEKGNLPPTDSRLRPDIRAYEEGNVDKAEEWKLKLEQLQRERRNK----GQDVEPKYFEKVSK-----NEWKYITSYWEHDWSDISQLW |
7 | 5h2dA | 0.34 | 0.29 | 8.62 | 3.65 | FFAS-3D | | -STAEQ-KTKAKVLLEEGSFLGYED---------------------------------KLRQRLKLGKDDRPSVSLWSVLKSMVGKDMTRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTVKRVAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTESPK--WDFFGESFVDSKFNGRSFDFKHLGLWYLTIRGKEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNHNTGDYCMIHFKARGSA----YEVKGEVYNAKGGKEWIFGGRWNESVSAKKVLKPN-----------------------------SLEEMQVTSSGGPKYDGTRFNVWHVNERPEFPFNLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHPVTKCDYWKFNGEYWKHKLADEGDIF |
8 | 5h2dA | 0.31 | 0.26 | 7.75 | 1.75 | EigenThreader | | -----------------------------------STAEQKTKAKVLLEEGSFLGYEDKLRQRLKLGKDDRPSVSLWSVLK--SMVGKDMTRMTL----PVSFLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSS----YASTVKRVAPLLGETFEYSRPDKSYRFFTEQVH--PPISATWTES--PKWDFFGESFVDSKFNGRSFDFKHLGLWYLTIRPDKEELYTYKKPNNQVVGILLGPQVDNYGDVKIVNHNTGDYCMIHFK----ARGSAYEVKGEVYNAKGGKEWIFGGRWNESVSAKKVLK-------------------PNSLEEMQ---VTSSGGP----KYDGTRFNVWHVNERPEFPF---NLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHPVTKCDYWKFNGQRRDHKLADEGDIF |
9 | 5zm8A | 1.00 | 0.80 | 22.52 | 5.96 | CNFpred | | ----------------------------------------------------------KHRTSLPAPMFSRSDFSVWTILKKCVGLELSKITMPIAFNEPLSFLQRITEYMEHVYLIHRASCQPQPLERMQSVAAFAVSAVASQWERTGKPFNPLLGETYELIREDLGFRFISEQVSHHPPISAFHSEGLNHDFLFHGSIYPKLKFWGKSVEAEPRGTITLELLKHNEAYTWTNPTCCVHNVIIGKLWIEQYGTVEILNHRTGHKCVLHFKPCGLFGKELHKVEGHIQDKNKKKLFMIYGKWTECLWGIDPVSYES------------------------------------TVQVIPGSKLLWRINTRPPNSAQMYNFTSFTVSLNELETGMEKTLPPTDCRLRPDIRGMENGNMDLASQEKERLEEKQREARRERAKEEAEWQTRWFYPGNNPYTGTPDWLYAGDYFERNFSDCPDIY |
10 | 7deiA | 0.41 | 0.32 | 9.31 | 1.17 | DEthreader | | ---------------------------------------------------------RR-RTSLPAPSPSS-SNISLWNILRNNI-KLSKVAMPVELNEPLNTLQRLCEELEYSELLDKAAQIPSPLERMVYVAAFAISAYASSYYRGSKPFNPVLGETYECIREDKGFQFFSEQVSHHPPISACHAES--RNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHYGEIVIKNLHDDCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCG-G--G-S----------------------------------------S--SACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKSD-----GSWVSNGTYLRKGFSLDHPVLW |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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