Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360
| | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC MASGSAGKPTGEAASPAPASAIGGASSQPRKRLVSVCDHCKGKMQLVADLLLLSSEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLSQALRERSSPRTLPPVNSNSVN |
1 | 4a01A | 0.08 | 0.06 | 2.45 | 0.83 | DEthreader | | -----------------------KC-EIQNAISIATYANSGVMGFLLAANGLLVLYIAINLFKIYY-----FAITGYGLGGSSMALFGRVGGGIYTKAADVGAAVIADNVGDNVGIAGMGSDLFGSYAESSCALVVSISGAMLYIVSVGILVCLLTTLFATD---E----------IKAVKEIEPALKKQLVISTVLMTIGVASWQLLCVAVGLWAGLIIGFVTEYYTSNAYSVQ----RRERTDALDAAGNTTAAIGKGFAIGS-ALV-----AL--GAFVSR--L---L--V--AI-SNTGGAWDNKKYEKGHKAAVIGDTIGDPLKTSGPSLNILIKLMAVESLVAPFFAHG--L---- |
2 | 6xz4A | 1.00 | 0.84 | 23.51 | 1.86 | SPARKS-K | | ---------------------------------------CKGKMQLVADLLLLSSEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLSQA------------------- |
3 | 2x0cA | 0.24 | 0.20 | 6.37 | 1.53 | MapAlign | | -------------------------IDPFTKHGQKECDNALRQLETVRELLENP------------VQPINDMSYFGCLDSVMENSKVLGEAMTGISQNAKNGNLPEFGDAIATASKALCGFTEAAAQAAYLVGVSDPNSQAGQQGLVEPTQFARANQAIQMACQSLG---EPGCTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLVKTIKALDGDFTEENRAQCRAATAPLLEAVDNLSAFASNPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGGLIQTARALAVNP----RDPPRWSVLAGHSRTVSDSIKKLITSMRDKAPGQ----------- |
4 | 2x0cA | 0.24 | 0.20 | 6.37 | 1.02 | CEthreader | | -------------------------IDPFTKHGQKECDNALRQLETVRELLENPVQPIN------------DMSYFGCLDSVMENSKVLGEAMTGISQNAKNGNLPEFGDAIATASKALCGFTEAAAQAAYLVGVSDPNSQAGQQGLVEPTQFARANQAIQMACQSLGEP---GCTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLVKTIKALDGDFTEENRAQCRAATAPLLEAVDNLSAFASNPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGGLIQTARALAVNPRD----PPRWSVLAGHSRTVSDSIKKLITSMRDKAPGQL---------- |
5 | 2x0cA | 0.24 | 0.20 | 6.37 | 1.40 | MUSTER | | -------------------------IDPFTKHGQKECDNALRQLETVRELLENPVQPIN------------DMSYFGCLDSVMENSKVLGEAMTGISQNAKNGNLPEFGDAIATASKALCGFTEAAAQAAYLVGVSDPNSQAGQQGLVEPTQFARANQAIQMACQSLGE---PGCTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLVKTIKALDGDFTEENRAQCRAATAPLLEAVDNLSAFASNPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGGLIQTARALAVNPRD----PPRWSVLAGHSRTVSDSIKKLITSMRDKAPGQL---------- |
6 | 6xz4A | 0.96 | 0.81 | 22.62 | 3.99 | HHsearch | | ------------------------------------CKGKMQLVADLL-LLS--SEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLSQA------------------- |
7 | 6xz4A | 0.99 | 0.83 | 23.36 | 3.28 | FFAS-3D | | ------------------------------------CKG---KMQLVADLLLLSSEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLSQA------------------- |
8 | 2x0cA | 0.24 | 0.20 | 6.30 | 1.58 | EigenThreader | | -------------------------IDPFTKHGQKECDNALRQLETVRELLENPVQPIN------------DMSYFGCLDSVMENSKVLGEAMTGISQNAKNGNLPEFGDAIATASKALCGFTEAAAQAAYLVGVSDPNSQAGQQGLVEPTQFARANQAIQMACQSLGEP---GCTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLVKTIKALDGDFTEENRAQCRAATAPLLEAVDNLSAFASNPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGGLIQTARALA----VNPRDPPRWSVLAGHSRTVSDSIKKLITSMRDKAPGQL---------- |
9 | 6xz4A | 1.00 | 0.84 | 23.51 | 1.94 | CNFpred | | ---------------------------------------CKGKMQLVADLLLLSSEARPVLFEGPASSGAGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECSAHAAYLAAVATPGAQPAQPGLVDRYRVTRCRHEVEQGCAVLRATPLADMTPQLLLEVSQGLSRNLKFLTDACALASDKSRDRFSREQFKLGVKCMSTSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVQTAILGGAMSVVSACVLLTQCLRDLAQHPDGGAKMSDHRERLRNSACAVSEGCTLLSQA------------------- |
10 | 4av3A | 0.09 | 0.07 | 2.63 | 0.83 | DEthreader | | ---------------TERMKISATRANGGSVMGLSVGGFALLGLVLVYLFGKGQVDNLN--IY-TNW---LGINFVPFAMTVSGYALGCSIIAMFDRVGGTGDVDVAGLGADLLESFVGIVSSIILASYMFPIYVQKNLVHVPKETQALISYPIFFALVGLGCSMLGILY-VIVKKP-ISWTSALLTVVLTAFLTYFYLKDLQGLDVLGFRFGAISPWFSAIIGIFS------------------------------------D-----A---------------GL-YGVAIAALGMLSFVATSVSVDSYGPDGNTTAAIGKGFAIGSAIFAALSLFASYMFSQISPSDLGAEFVGV---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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