Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCSSSCCCCCCCCCCCCSSSSSCCCCHHHHHHHHHHHCCCCCCCCCCCSSSCCCCCHHHCCCCCCCCSCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCSSSSCCCCCCCC MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHIKSMKLKSRNLLKKNNSCSPAGPSNLKSNISSQQVLLEHSYAFRNPMEAKKRIIKLEKEIASLRRKMKTCLQKERRATRRWIKATCLVKNLEANSVLPKGTSEHMLPTALSSLPLEDFKILEQDQQDKTLLSLNLKQTKSTFI |
1 | 2d8rA | 0.95 | 0.38 | 10.58 | 1.26 | FFAS-3D | | MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHISGPSS----------------------------------------------------------------------------------------------------------------------------------------- |
2 | 2d8rA | 0.87 | 0.35 | 9.88 | 1.23 | SPARKS-K | | MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIF---------DFCTHISGPSSG------------------------------------------------------------------------------------------------------------------------------- |
3 | 2d8rA | 0.93 | 0.38 | 10.59 | 1.31 | MUSTER | | MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHISGPSSG---------------------------------------------------------------------------------------------------------------------------------------- |
4 | 2jtgA | 0.45 | 0.17 | 5.00 | 3.46 | HHsearch | | MVQSCSAYGCKNRYDKDKPVSFHKFPLRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKENAVPTIFLELVPR---------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 2d8rA | 0.93 | 0.38 | 10.59 | 0.95 | CEthreader | | MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHISGPSSG---------------------------------------------------------------------------------------------------------------------------------------- |
6 | 2d8rA | 0.91 | 0.37 | 10.35 | 0.72 | EigenThreader | | MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFC--------------------------------------------------------------------------------------------TH--ISGPSSG------------------------------------------ |
7 | 2jtgA | 0.45 | 0.17 | 4.87 | 1.19 | FFAS-3D | | MVQSCSAYGCKNRYDKDKPVSFHKFPTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKENAVPTIFLELV------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 2jtgA | 0.44 | 0.17 | 4.88 | 1.10 | SPARKS-K | | MVQSCSAYGCKNRYDKDKPVSFHKFPTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKENAVPTIFLELVPR---------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 2d8rA | 0.93 | 0.38 | 10.59 | 0.67 | CNFpred | | MPTNCAAAGCATTYNKHINISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHISGPSSG---------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6jxaA | 0.05 | 0.04 | 1.71 | 0.67 | DEthreader | | SLIMIIQFDVMSSEL-----PYMGQENY--VE--------------------EFIRTYLNRKNEN----YSLLFRKCDIT-LASCLLNEKNIHFQRNLDQDNSLDVKDDVVIEKLLLNKAINVEFNTL-----YKEIGTIPPQLTMKLLSLYSVMSLQCEMSVELANLK-FV-Q-NT------K---TLRLANLYWNQKALKAGIITSILPIHIDLG-IAF---I-NS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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