Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCSCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC MTLQGRADLSGNQGNAAGRLATVHEPVVTQWAVHPPAPAHPSLLDKMEKAPPQPQHEGLKSKEHLPQQPAEGKTASRRVPRLRAVVESQAFKNILVDEMDMMHARAATLIQANWRGYWLRQKLISQMMAAKAIQEAWRRFNKRHILHSSKSLVKKTRAEEGDIPYHAPQQVRFQHPEENRLLSPPIMVNKETQFPSCDNLVLCRPQSSPLLQPPAAQGTPEPCVQGPHAARVRGLAFLPHQTVTIRFPCPVSLDAKCQPCLLTRTIRSTCLVHIEGDSVKTKRVSARTNKARAPETPLSRRYDQAVTRPSRAQTQGPVKAETPK |
1 | 1w63M | 0.07 | 0.06 | 2.60 | 0.69 | CEthreader | | --------------------SASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMFGYPQTTDSKILQEFITQEGHKLETGVSWRSEGIKYRKNEVFLDVIEAVNLLANGNVLRSEIVGSIKMRVFLSGMPELRLGLTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSREYMVKAKSQFKRRSTANNVEIHIPSPKFKTTVGSVKWVPENSEIVWSVKSPGGKEYLMRAHFGLKP |
2 | 5a1uG | 0.09 | 0.09 | 3.31 | 0.67 | EigenThreader | | TTPDGRLLHEMILVCDAYRKDLQKEAELLEPLMPEHRHAIYTIYRNFEHLIPDAPELIHVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVSERARFIRCIYNLAGTLVTLIKAAAQCYIDLIIKELQLALDLVSSRNVEELVIVLKKEVIKTNLVRTLHSCSVRFPLMEFLSDSNEAAAADVLEFVREAIQRFDNLR---------MLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVRRSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEE |
3 | 2xd8A | 0.09 | 0.08 | 3.15 | 0.48 | FFAS-3D | | QVALGRSNLSTGTGYGGATDKYALYLKLFSGEMFKGFQHETIARDKNGKSLQFIYTGRMTSSFHTPTPILGNADKAPPVAEKTIVMDDLLISSAFVYDLDETLAKIGYALAE-----KYDRLIFRSITRGNAFYDAAAAMD------------------EKGVS--SQGRCAVLNPRQYYALIQDIGSNGLVNRDVQGSALQSGNGVIEIAGIHIYKSMNIPFLGKYGVKYGGTTGETSPGNLGSHINATGGVNNDYGTNAELGAKSCGLIFQKEAGVVEAIGPQVQVTNGDSVIYQGDVILGRMAMGADYLNPAAAV------ |
4 | 5yfpB | 0.07 | 0.07 | 2.76 | 0.94 | SPARKS-K | | HMISKIIHSQRLILQNNTNQDKSQGCVELSYYLKINQLFQIISDTGKDSEGLKSTVEPNKVNTISGTSYLNLNCQPSS-----QGLTDSP-----------------TIIEMWLLILKYINDLWKICDQFIEFWEHIEKFLDGTY-QNSIINEKRKENILIGDSNIIESYQKSLILKEEQINEVRLKGEEFITSVSQNLISFFTSSQSSL-PSSLKDSTGDITRSNKDSGSPLDYGFIPPNCNGLSCLAQLNITTNCVGAISSTKLRDISNFYQLENWQVYETVTFSSKSQDLTFEYGVTQFPEIVTAYEKLPIINGISVVSYP |
5 | 5bunA | 0.10 | 0.02 | 0.79 | 0.51 | CNFpred | | --------------------------------------------------------------------------------WRGLTLQEKAAGIQDVTYQTDQQTLILNTANAYFKVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6bcuW | 0.06 | 0.04 | 1.62 | 0.67 | DEthreader | | -CLQYEWQPRARYKQLFHIFVLTTPILPLCLLPTI-----------------------------------------IEEGTAFRHSPFAELVSHRRALDLLLFIWAKILMFILAVNICGRFAGTLVALSHLVVENFCTVALQF-I-------------------WRLLHADPYPE-----------------------DKD-S-ICF--WD-W--EK------G--EKL-DYFHNGNPRYTRVTAMELLWKNAD-KNPEMVT-AWQGLS--MVVDWMSSGIVRIW------------QD--IP-TGADSLGSIRVYDRRM---- |
7 | 5a1uE | 0.04 | 0.04 | 2.05 | 0.97 | MapAlign | | DSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFNRVVEEVRAGAVSALAKFGAQNEEMLPSILVLLATRQEIFQEQLAAVPEFQGLGPLFKSSPEPVALTESETEYVIRCTKHTFSDHLVFQFDCTNTTLENVTVQMEPTEAYEVLSYVPARSLPYNQPGTCYTLVALMKFTVKDCDPNTGEIDVPENKNTHTLLLAGVFRGGHDILVRSRLLLLDTVTMQVTARSSEELPVDIILASV---------- |
8 | 6etxG | 0.09 | 0.09 | 3.26 | 0.73 | MUSTER | | MQFRKVCNHPELFERQETWSPISLKPYHISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCF-------------------SFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGY----SDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYALDVLLTRLKS |
9 | 1n2dC | 0.24 | 0.03 | 1.06 | 1.93 | HHsearch | | -----------------------------------------------------------------------------------------------------QISQAIKYLQNNIKGFIIRQRVNDEVNCATLLQAAYRGHSIRANVF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6w09E | 0.10 | 0.06 | 2.20 | 0.52 | CEthreader | | ---------------------------------------------------------------------------------------------------------------------------NFNVYKAIRPYLAHCPDCGEGHSCHSPVALERIRNEATDGTLKIQVSLQIGIKTDDSHDWTKLRYMDNHMPADAERARLFVRTSAPC-TITGTMGHFILARCPKGETLTVGFTDSGKISHSCTHPFHHDPPVIGREKFHSRPQHRRTLMSQQSGNVKITVNSQTVRYKCNCGDSNEGLTTTDKVINNCKVDQCHAAVTNHK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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