Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MSKGTSSDTSLGRVSRAAFPSPTAAEMAEISRIQYEMEYTEGISQRMRVPEKLKVAPPNADLEQGFQEGVPNASVIMQVPERIVVAGNNEDVSFSRPADLDLIQSTPFKPLALKTPPRVLTLSERPLDFLDLERPPTTPQNEEIRAVGRLKRERSMSENAVRQNGQLVRNDSLWHRSDSAPRNKISRFQAPISAPEYTVTPSPQQARVCPPHMLPEDGANLSSARGILSLIQSSTRRAYQQILDVLDENRRPVLRGGSAAATSNPHHDNVRYGISNIDTTIEGTSDDLTVVDAASLRRQIIKLNRRLQLLEEENKERAKREMVMYSITVAFWLLNSWLWFRR |
1 | 4neiA | 0.05 | 0.05 | 2.30 | 0.57 | CEthreader | | ---------------HPNLIVTEQDVANIAASWESYDAYAEQLNADKTNLDAFMAEGVVVPMPKDAGGGYTHEQHKRNYKAIRNAGGDEKYLTFAKDLLLAYAKMYPSLGEHPNRKEQSPGRLFWQIIDGLAAEEKQEIESGVFLPMAKFLSVESPETFNKIHNHGTWAVAAVGMTGYVLGNDELVEISLMGLDKTGKAGFMKQLDKLFSPDGYYTEGPYYQRYALMPFIWFAKAIETNEPERKIFEYRNNILLKAVYTTIDLSYAGYFFPINDALKDKGIDTVELVHALAIVYSITGDNTLLDIAQEQGRISLTGDGLKVAKAVGEGLTQPYNYRSILLGD |
2 | 6g70A | 0.04 | 0.04 | 2.02 | 0.63 | EigenThreader | | -DFPPEFEKFWKTVEMNPQDFTGWVYLLQYVEQENHRKAFDKFFVHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHHFQRFKEHVQNNLQEMFNYNEHEVSKRWTFEEGIKRPPLEKAQLKNWKEYLEFEIENGTHERVVVLFERCVISCALYEGVRHVFSRACTVHLPKPMAHMLWAAFEEQQGIILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKSNNESSFYAIKLARHLFKIKVLLEAIEKDKKLYLNLLEMEYSCNEENILNCFDKAIHGS |
3 | 6so5C | 0.14 | 0.04 | 1.30 | 0.57 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPSFSSFMSRVLQKDAEQESQMRAEIQDMKQELSTVNMMDE-------------------------FARYARLERKINKMTDKLKTHVKARTAQLAKSVAFYVLQAALMISLIWCWI-- |
4 | 5yfpB | 0.07 | 0.06 | 2.63 | 0.95 | SPARKS-K | | NFIKNTTSSSNENPILRWMSIKMNGFQNELNELSGHMISKIIHSQR---------LILQNNTNQDKSQGCVELSYYLK-----------INQLFQIISDTGKDSEGLKSTVEPNKV--------------NTISGTSYLNLNCQPSSQGLTDSPTIIEMWLLILKYINDLWKICDQIEKFLDGTYQNSIINEKRKENILIGDSNIIESYQKSL----ILKEEQINEVRLKGEEFITSVSQNLISFFTSSQSSLPSSLKDSTGDITRSNKDSGSPLDYGFIPPNCNGLSCLRYLPKIVEPILKFSTELAQCRNTLSTIINRCVGAISSTKLRDISNFYQLENW |
5 | 4fgvA | 0.10 | 0.03 | 1.18 | 0.56 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTIRECLVYLTHLDVVDMEQIMTEKLARQVD-------------GSEWSWHNCNVLCWAIGSISMAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNIMYIVGQYPRFLKAHW |
6 | 6lcpA | 0.07 | 0.04 | 1.82 | 0.67 | DEthreader | | -------------FPIFGGVNPGLNSVPLIVIITVTAIKDAIEDYRRTLDELNAWELVETKGETNLK-LYLGCHI-A-ITPSKRARI--------------------------IPKSWNIS----DDVGQIEYI--AAGMDNAIREIARAIRGLRE-LHD----------------------------------------------NPYLHD--------------QPGD-PPKMIFARTVLGMGINVFPVRMILLRELSEEY------LGGT--AI--E---DRLQTIGDIQFRFLQRLVLHGRWSYRRLAETISNFFYKIGQSVMSFFIPFIFVVLTPTA |
7 | 1vt4I3 | 0.05 | 0.05 | 2.26 | 1.05 | MapAlign | | ERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-- |
8 | 2atyA | 0.10 | 0.10 | 3.54 | 0.56 | MUSTER | | ISCGSPPPILNGRISVIRYSCSGTFRLIGEKSLLCITKDKVDGTDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFA-CKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEGSIEGPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSVEVHTAQTQPREEQFNSTFRSVSEMHQDWLNGKEFKAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSTDFFPEDITVEQPAENYKNTQPIMNTNESYFVYSKLN---------VQKSNWEA---------TFTCSVL--LHNHHT--EK |
9 | 3csxB | 0.18 | 0.03 | 0.96 | 0.50 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDNNPTPEAVADLKKKVRKLNSKAGDLAEG--LPTDYENLVETAEKTYEIFRELDQLKK |
10 | 1vt4I3 | 0.05 | 0.05 | 2.26 | 0.57 | CEthreader | | KPYICDNDPKYERLVNAILDCSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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