Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCSSCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MSSGTELLWPGAALLVLLGVAASLCVRCSRPGAKRSEKIYQQRSLREDQQSFTGSRTYSLVGQAWPGPLADMAPTRKDKLLQFYPSLEDPASSRYQNFSKGSRHGSEEAYIDPIAMEYYNWGRFSKPPEDDDANSYENVLICKQKTTETGAQQEGIGGLCRGDLSLSLALKTGPTSGLCPSASPEEDEESEDYQNSASIHQWRESRKVMGQLQREASPGPVGSPDEEDGEPDYVNGEVAATEA |
1 | 1d9qB | 0.06 | 0.05 | 2.18 | 0.48 | CEthreader | | ----------YEIITLTSWLLQQEQKGIIDAELTIVLSSISMACKQIASLVQRANISNLTGEDQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLD---------GSSNLDAAVSTGSIFGIYSPNDECLPDFGDDSDD-----------NTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLTI-------GKGVFVFTLDPLYGEFVLTQENLQIPKS |
2 | 1mhsA | 0.08 | 0.08 | 3.22 | 0.53 | EigenThreader | | VDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKPEVVPGDGDQVFASSAVGEAFVVITATGDNTFVGRAAALVNAASGGTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPVAEFATRGFRSLIMPCMDPPRHDTYKTVCEAKTLGGIARETSRQLGLGNAERLGLGGGGDMPGSEVYDFVEAADGFA |
3 | 5w7lA | 0.13 | 0.09 | 3.12 | 0.40 | FFAS-3D | | ----IDILGALFLLILTIIIATAIFIYFKVSRDV----IFTQARPGLNEKIFKMYKFKTMSDERDANGELLPDDQRLGKFGKLIRSLSLDELPQLFNVLKG-----DMSFIGP------------RPLLVEYLPIYN------------------------ETQKHRHDVRPGITGLAQVNGRNAISWEKKFEYDVYYAKNLSFMLDVKIALMT----------------------------- |
4 | 3j3iA | 0.05 | 0.05 | 2.17 | 0.87 | SPARKS-K | | LSGDLSKAVGRVHQMLGMVAAKDIISATHMQSRTGSHGIRQYLNSNS------------RLVTQMASKLTGIGLFDATPQMRIFSEMDTADYADMLHLTIFENGPISFLVEKLLSAAGYDVTLANIRIEHHKMPTGAFTTRWVRDSALRLTPRSRTAHRVDMVRECDFNPTMNLKAAGLRGSGVKSRRRVSEVPLAHVDSPRWLTREGPQLTRRVPIIDPAYESGRSSSTSQHEEEMGLFDAE |
5 | 6n6qA | 0.06 | 0.01 | 0.53 | 0.40 | CNFpred | | ----------QFAQHEMVIALAAILHQFELE-PRPGYELKVSETLTLKPSDLQLRLRNRV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6iv9A | 0.08 | 0.06 | 2.28 | 0.67 | DEthreader | | ----------------------------------NDETPVDNIHQLIILEKAVTNIVLM-LSATYEVFTHPLNTSEAYKKRDTLDYVASDLLFSMIYMLT----YFL---EINDLLT------------ELFIVKNASMRKAAAKLTMFRDAL-TILGI-DDRISEILKLKEKGK-IHRNFTNIESSRFVYLKYVKNLVNVNARYVIAILLCVDIATRYACLTVVRE----------HMQVKA |
7 | 1vt4I3 | 0.08 | 0.08 | 3.22 | 0.95 | MapAlign | | LQQLKFYKPYIPKYERLVNAILDFLPKGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
8 | 6etxG | 0.10 | 0.10 | 3.78 | 0.74 | MUSTER | | IRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERREGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKES |
9 | 2pffB | 0.18 | 0.17 | 5.49 | 1.02 | HHsearch | | CYLEGNDIHAAAKLLELIKNYITARIMAKRPFDKKSNSA-LFRAVGGNAQLVDLYQTYHVLVGDLIETLSERTTLDAEKVFNILEWLENPSNTP------------DKDYLLSIPIAHYAKLLGFTPGEIAETDSWESFFVSVRKAIT---VLFFIGVRCYEATSLPPSILNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVKAPSGLDQSRIPDLINKDLVKNNV |
10 | 1vt4I3 | 0.09 | 0.09 | 3.42 | 0.43 | CEthreader | | ICDNDPKYERLVNAILDFLPKIEENLICS-----KYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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