Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
| | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHSSSSCCCCCCCSSSSSHHHCCCHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCSSSSSSSSSCCSCSSSSSSSSCC MGSAHPRPWLRLRPQPQPRPALWVLLFFLLLLAAAMPRSAPNDILDLRLPPEPVLNANTVCLTLPGLSRRQMEVCVRHPDVAASAIQGIQIAIHECQHQFRDQRWNCSSLETRNKIPYESPIFSRGFRESAFAYAIAAAGVVHAVSNACALGKLKACGCDASRRGDEEAFRRKLHRLQLDALQRGKGLSHGVPEHPALPTASPGLQDSWEWGGCSPDMGFGERFSKDFLDSREPHRDIHARMRLHNNRVGRQAVMENMRRKCKCHGTSGSCQLKTCWQVTPEFRTVGALLRSRFHRATLIRPHNRNGGQLEPGPAGAPSPAPGAPGPRRRASPADLVYFEKSPDFCEREPRLDSAGTVGRLCNKSSAGSDGCGSMCCGRGHNILRQTRSERCHCRFHWCCFVVCEECRITEWVSVCK |
1 | 6ahyB | 0.38 | 0.24 | 7.25 | 0.83 | DEthreader | | ----------------------------------------------------------LLCGSIPGLVP-QLRFCRNYIEIMPSVAEGV-LGIQECQHQFRGRRWNCTTID--DSLAIFGP-VLDATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCD-S-H--H-----------------------------------G-------WGGCSEDADFGVLVSREFADARENRPDARSAMN-HNNEAGRTTILDHMHL-CC-HGLSGSCEVT-CWWAQPDFRAIGDFL-D-YDSASEMVVEHREWVETLRA------------YSLFPPTERDLVYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLC---CGRGHNTRTER----------------RIY-DVHTC-- |
2 | 4f0aB | 0.37 | 0.25 | 7.49 | 4.18 | SPARKS-K | | ------------------------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPEST---LQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRI-------------------------------------GGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKL------------------EMRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLRVEEKKTESSCNCKFHWCCTVKCEQCKQVVIKHFCA |
3 | 4f0aB | 0.37 | 0.25 | 7.55 | 1.71 | MapAlign | | ------------------------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPEST---LQLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRI-------------------------------------GGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEM------------------RGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGSQWERCKRLCCGLRVEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
4 | 4f0aB | 0.37 | 0.25 | 7.49 | 1.62 | CEthreader | | ------------------------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTL---QLATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRIG-------------------------------------GRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMRGAIADAF------------------SSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGWERRSCKRLCTDCGLREKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
5 | 4f0aB | 0.37 | 0.25 | 7.49 | 2.53 | MUSTER | | ------------------------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQ---LATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRIGG-------------------------------------RGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKL------------------EMRGAIADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
6 | 4f0aB | 0.37 | 0.25 | 7.49 | 6.59 | HHsearch | | ------------------------------------------------------------------------TGPKAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQLAT---HNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGR-------------------------------------IGGRGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMR--GAI----------------ADAFSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNRRSCKRLCTDCGLEEKKTEIISSCNCKFHWCCTVKCEQCKQVVIKHFCA |
7 | 4f0aB | 0.37 | 0.25 | 7.48 | 2.93 | FFAS-3D | | ---------------------------------------------------------------------------KAYLTYSASVAVGAQNGIEECKYQFAWERWNCPESTLQ---LATHNGLRSATRETSFVHAISSAGVMYTLTRNCSMGDFDNCGCDDSRNGRIGG-------------------------------------RGWVWGGCSDNAEFGERISKLFVDGLETGQDARALMNLHNNEAGRLAVKETMKRTCKCHGISGSCSIQTCWLQLAEFRDIGNHLKIKHDQALKLEMRGAIADA------------------FSSVAGSELIFLEDSPDYCLKNISLGLQGTEGRECLQSGKNLRSCKRLCTDCGLRVEEKKTESSCNCKFHWCCTVKCEQCKQVVIKHFC- |
8 | 7kc4D | 0.33 | 0.21 | 6.34 | 1.25 | EigenThreader | | --------------------------------------AWSVNNFLITGPKAYLTY-------------------------TTSVALGAQSGIEECKFQFAWERWNCPENALQLST---HNRLRSATRETSFIHAISSAGVMYIITKNCSMGDFENCGCGWIW------------------------------------------------GGCSDNVEFGERISKLFVDSLEKGKDARALMNLHNNRAGRLAVRATMKRTCKCHGISGSCSIQTCWLQLAEFREMGDYLKAKYDQALKI----------------------EMDKFLPSAEAELIFLE-ESPDYCTCNSSLGIYGTEGRECLQNRSCGRLC---TECGLQVTEVISS-----CNCKFQVKCD----QCRHVVYYCA |
9 | 6ahyB | 0.41 | 0.30 | 8.97 | 3.97 | CNFpred | | ----------------------------------------------------------LLCGSIPGLVPMQLRFCRNYIEIMPSVAEGVMLGIQECQHQFRGRRWNCTTIDD--SLAIFGPVLDMATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHMGP--------------------------------------PGEGWMWGGCSEDADFGVLVSREFADARENRPDARSAMNMHNNEAGRTTILDHMHLMCMCHGLSGSCEVMTCWWAQPDFRAIGDFLMDMYDSASEMVVEMHRE-------RGWVETLRAMYSLFMPPTERDLVYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEMRMEMCHCIFHWCCYVSCQECIRIYDVHTCM |
10 | 7kc4D | 0.31 | 0.19 | 5.79 | 0.83 | DEthreader | | ------------------------------------------------W---S---V-NNFL-I--T---GP-K--AYLTYTTSVALGAQSGIEECKFQFA-WERWNCPE--NALQLSTHNRLRSATRETSFIHAISSAGVMYIITKNCSMGDFENCGCG-W-I--W------------------------------------------GGC--SDNVEFGERISKLFVDSEKGKDAR-ALMNLHNNRAGRLAVRATMKRTCKCHG-SGSCSIQTCWLQLAEFREMGDYLKAKYDQALKIEMDK-----FLP------------------SAEAELIFLEESPDYCTCNSSLGIYGTEGRECLQNR---SCGR-LCTECGLQVEERKTEV-----------------HVVSKYYCA- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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