Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCHHHHHHHHHCCSSSSCHCHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC MAGAGPKRRALAAPVAEEKEEAREKMMAAKRADGAAPAGEGEGVTLQGNITLLKGVAVIVVAIMSSGIFVTPTGVLKEAGSPGLALVVWAACGVFSIVGALCYAELGTTISKSGGDYAYMLDVYGSLPAFLKLWIELLIIRPSSQYIVALVFATYLLKPLFPTCPVPEEAAKLVACHSVQLIVHQPTQVI |
1 | 5oqtA | 0.20 | 0.16 | 5.07 | 1.00 | DEthreader | | -----------------------------------PIQLLMKESGKGLRKLGADLTMLGIGAIIGTGIFVLTGVAAAEHAGP-ALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLIL-EYGVASSAVAVGWSGYFQGLLSGELPKTSDLPAIIIVLFITFLLNLGAKKA |
2 | 6li9B | 0.40 | 0.30 | 8.84 | 1.65 | SPARKS-K | | -------------------------------------------------LGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSV |
3 | 3mktA | 0.08 | 0.08 | 3.27 | 0.58 | MapAlign | | YKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLVIGFIGLLLNIPLNWIFVGCGVATAIVYWIMLLLLLFYIVSIRVGHKLVGLMTGLATACITAAIYQCMDAVQVVAAGSLRGYYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQR |
4 | 6l85A | 0.07 | 0.07 | 2.99 | 0.44 | CEthreader | | GLVAVGINGVNWKTFLFIVLSWVVSPVLGGLISFVMFKLISLSVFHTKNPKKSSTVAIPFFISLAIFTMISLFVKKTLKQPLSESFLLGIAFSLVTFFVVHFAVRKLINEKKDVYDAVENVFKRAQILTSCYVSFSHGANDVANAAGPVAAVMIVASTGVVPKTVEIPFLALLLGGIGISLGVFFLGQKV |
5 | 6irsB | 0.86 | 0.64 | 17.93 | 1.19 | MUSTER | | --------------------------------------------------TLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVWAACGVFSIVGALCYAELGTTISKSGGDYAYMLEVYGSLPAFLKLWIELLIIRPSSQYIVALVFATYLLKPLFPTCPVPEEAAKLVACLCVLLLTAVNCYSV |
6 | 6y5rA1 | 0.14 | 0.12 | 3.96 | 2.62 | HHsearch | | ----------------------------MANYTNLTQGAKEHEEAENIQMGTFMGVYLCLQNIFGVILFLRLTWVVGTAG-VLQAFAIVLICCCCTMLTAISMSAIATNVVPAGGSYFMISRALGPEFGGAVGLCFYL-GTTFAAAMYILGAIEIFLVYIVPSA-AMLNNMRVYGTAFLVLMVLVVFIGV |
7 | 6li9B | 0.41 | 0.31 | 8.98 | 1.77 | FFAS-3D | | -------------------------------------------------LGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISVNSLSV- |
8 | 6li9B | 0.40 | 0.30 | 8.84 | 0.82 | EigenThreader | | -------------------------------------------------LGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSV |
9 | 6f2wA | 0.27 | 0.21 | 6.29 | 1.29 | CNFpred | | ----------------------------------------------MKEVSGITALTVVVGTVIGAGIFFKPTAVYGAAGAPGLGLLAWFVAGIITIAGGLTVAEIGTIYPQTGGMMIYLEKVYGRWLGFLVGWAQMVIYYPANIAALAIIFATQFVNLFALSDST-IVPTAILTSIFLMGVNFLGTKYS |
10 | 6kkrA | 0.07 | 0.05 | 2.22 | 1.00 | DEthreader | | ----------------------------E-KHGLPS----PLYVVADIATSFTVLVGIFFPSVTG--IMAGSNRSGDLRDAQKSIPVGTILAIITTSLVYFSSVVFGEGLRDKYGNLVVGT-LAW-PSPWVIVIGSFF-STCGAGLQSLTGAPRLLQAIAKDNGHGKPTWALLLTALIAELGILIASLDM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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