Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHHHHHCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCCHHHHCCCCCCSSSCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHCHHHCCCCCCCCCCCCCCHHHCCCCCSSSCCCCCCCCCCHHHHHCCCCCSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCSCCC MEGSSSYEVPSVAAADLEEGAGQTRSLPATPSKDVHKGVGGIIFSSSPILDLSESGLCRLEEVFRIPSLQQLHLQRNALCVIPQDFFQLLPNLTWLDLRYNRIKALPSGIGAHQHLKTLLLERNPIKMLPVELGSVTTLKALNLRHCPLEFPPQLVVQKGLVAIQRFLRMWAVEHSLPRNPTSQEAPPVREMTLRDLPSPGLELSGDHASNQGAVNAQDPEGAVMKEKASFLPPVEKPDLSELRKSADSSENWPSEEEIRRFWKLRQEIVEHVKADVLGDQLLTRELPPNLKAALNIEKELPKPRHVFRRKTASSRSILPDLLSPYQMAIRAKRLEESRAAALRELQEKQALMEQQRREKRALQEWRERAQRMRKRKEELSKLLPPRRSMVASKIPSATDLIDNRKVPLNPPGKMKPSKEKSPQASKEMSALQERNLEEKIKQHVLQMREQRRFHGQAPLEEMRKAAEDLEIATELQDEVLKLKLGLTLNKDRRRAALTGNLSLGLPAAQPQNTFFNTKYGESGNVRRYQ |
1 | 3ojaA | 0.13 | 0.12 | 4.04 | 0.52 | CEthreader | | KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCSRGQ--GKKNIYLANNKITMLDLDEGCRSRVQYLDLKLNEIDTVN----FAELAASSDTLEHLNLQYFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK------NQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSTERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVVREQNLASQLG---------------------------------------------- |
2 | 4pufA | 0.08 | 0.07 | 2.80 | 0.77 | EigenThreader | | PAKEAANREEAVQRMRDCLKNNKTLGLTTIPAYIPEQITTLILDNNELKSLPE---NLQG----NIKNQLT----SIPATLPDTIQEMELSINRIT--ELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSISNSLTALPETLPPGL--------------------KITVLPETLPPTITTLDVSRNALTNLPENLPAALQSLPHFRGEGPQPTNMQRLMSSVDYVRVTRPLHQAV---QGWLTSLEEEDVNQWRAFEAEAAAFSGFLDYLGDTQNTRHPDFKEQVSAWLMRLAED--------------------SALRETVFIIAMNATISAYHQMQEATLVHDAERGAELIMAGREIFRLEQIESLAREKVKRLFFIDEVEVFLGFQNQLRESLSLTTMTRDMRFYNVSGIT---------------ESDLDEAEIRIKMAENRDFHKWFALWWHKVLERIAPEEWREMMAKRDECIETDEYQSRVNAELEDLRAIGIKIMEEINQTLFTEIMENILLK |
3 | 4pufA | 0.15 | 0.12 | 4.21 | 0.91 | FFAS-3D | | LKILGLTTIPAYIPEQITTDNNELKSLPENLQGNIKTSIPATLPDTIQEMELSINRITELPE-RLPSALQSLDLFHNKISCLPENLPEELSEITHLNVQSNSLTALPETL--PPGLKTLEAGENALTSLPASL--PPELQVLDVSKNQITVLPETLPPT--------ITTLDVSRNALTNLPENLPAALQIMQASRLPESLPHFRGEGPQPTRIIVEYNPFSERTIQNGDFSIVRVTRPLHQAVQGWLTSL---EEEDVNQWRAFEAELDYLGDTQNTRHPDFKEQVSAWLMRLAEDSA-------------------------LRETVFIIAMNADRVTLAYHQMQEATLVHDAERHLAELIMAGREIFRLEQIESLAREKVKRLFFIDEVEVLGFQNQLRESLSLTTMTRDMRFYNVSGITESDLDEAEIRIKMLERIAPEEWREMMAKRDECIETDEYQSRVNAENQTLFTEIMENILLKKEVSSL----------------------------------------- |
4 | 7abiu | 0.10 | 0.10 | 3.57 | 0.95 | SPARKS-K | | MSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYARVEGREIISNLAKAAGLATMISTMRPDIYVRNTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGIHLRSLVEIIEHGLVD-----EQQKVRTISALAIAALAEAAVLKPLWKGIRQHRGIPLMDAEYANYYTREVMLILIREFQSP-DEEMKKIVLKVVKQCCGTDGVEANYILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRILKDEAEQYRKMVMETIEKLGIDHKLEEQLIDGILYAFQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNQQAADLISRTAVVMKTLGVVLYEYLGEEYPEVLGSILGALKAIVNVI-------GMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYWMRICFELLELLKIAKAIPHDVLATLLNNLKVQERQNCTTVAIVAETCSPFTVLPALMNEYRVPELNVQNGV |
5 | 3ojaA | 0.15 | 0.08 | 2.81 | 0.99 | CNFpred | | -----------------------------------------------QYLDLKLNEIDTVNELAASDTLEHLNLQYNFIYDVKGQ--VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCTLRDFFSK-NQRVQTVAKQTVKKLTGQEECTVPTLGHYGAYCCEDLPAPFADRLIALKRK---------------------------EHALLS----------ERLECERENQARQREIDALKEQYR--------------------------------------------TVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVGQIELQHATEEQ-----------------------------------------------------SPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEA------------------------------------------- |
6 | 5u1sA | 0.04 | 0.02 | 1.30 | 0.67 | DEthreader | | -HNIIRDFIAIDLAIED---ITTVDHSLQHLMIVKLINNNALLASSEIIFLF-------------HSLKNILLSNLKILLQILKKLVDEYLHIELYLLLALTKVLFFTTSCKVL--LKFLQYIKQFVFSLLMNKIYLNSFYLSYSMLYDKMLLTWSCISVDDLNVILENA-TN--------------F------------------------------ISATLKCLVCL--T-----------------------------LP--KN--KD-I--------------------------------------------------------DESAAALLSELSSFLLKTANFKFISSFAIHCTRIHNLPMSLYIKVILLNIKIFNESAKLIKEYMPKNVILESLKLD-----------TLDNHELSKISSTDPRTDLLSKHLVQGFSLFLKLNPEIKKYRATMTTN--SI--FHTFLVVITRVPSYVCL---HGGGEVSIIAPSF----IYTYLLGGC-------------- |
7 | 6hluA | 0.10 | 0.10 | 3.59 | 0.76 | MapAlign | | KSLTELSLSSNQISDIAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELQLSRNQISDI--APLESLNSLSKLWLNGNQITDI-APLASLNSLTELELSSNQITDIA-PLASLKSLSTLWLSSNQIVKQGKEAVRQYFQSIEEARSTKQAPNIKGLENDDELKECLFHFWDEIMHASHQFFMTRSSVYMLLLDSRTDSNKHYWLRHIEKYGGKSPVIVVMNKIDENPSYNIEQKKINERSCVESIAKSLKSAVLHPDSIYGTPLAPSWIKVKEKLVEATTAQRYLNRTEVEKICNDSGITDPGERKTLLGYLNNLVLYFIYVLDPHWVTIGVYRIIALGYILYLLEQRYLLDIMKQFELCYDEGKGLFIIPSNLPTQIDITEGEPLRFIMKYDYLPSTIIPRLMIARMQWRYGMVLKSQDHEGALAKVVAETKDSTITIAIQGPRCKREYLSIIWYEIKKINTNLDVKEFIPLPGHPDELVEYKELLGLEKMGRDEYVSGKLEKVFS |
8 | 3ojaA | 0.12 | 0.11 | 3.77 | 1.00 | MUSTER | | GNRYKIEKVTDSSKQALASLRQSAWNVKEPLSQISAADLAP--FTKLELLNLSSNVLYETLDLESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL---NLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL-----RDFFSKNQRVQTVAKQTVKKLTG-QNEEECTVPTLGHYGADLPAPFADRLIALKRKEHALLS---------TERLECERENQARQREIDALKEQYRVIDQVTLRKQAKITLEQKKKALDEQVSNG-AHAELDGTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLK-KLNGEADLALASANATLQELVVREQNLASQLG------------------------------------------ |
9 | 4b8cD1 | 0.25 | 0.08 | 2.57 | 0.66 | HHsearch | | LHPPSLLNNPIWKLQLHLAVSAQSLGQPNIYARLCTKDSTAKDDQLWHALDLSNLQIFNISNIFKYDFLTRLYLNGNSLTELPAEI-KNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEQFLKILTEKSVTGLIFYLRDNRPEI--P---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6hluA | 0.11 | 0.11 | 3.85 | 0.43 | CEthreader | | TDIAPLASLKSLTEDIAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELQLSRNQISDI--APLESLNSLSKLWLNGNQITDIAP-LASLNSLTELELSSNQITDI-APLASLKSLSTLWLSSNQISDIAPLASLESLSELSLSSNQISDISPLASLNSLTGFDVRRNPIKRLPETITGFDMEILWNDFSSSGFITFFDNPLESPPPEIVKQGKEAVRQYFQSIEEARSKGEALVHLQEIKVHLIGDGMAGKTSLLKQLIGEGLNVVTKQAPNIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSNKHYWLRHIEKYGKSPVIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCVESIAKSLKSAVLHPDSIYGTPLAPSWIKVKEKLVEATTAQRYLNRTEVEKICNDSGITDPGERKTLLGYLNNLGIVLSEIYVLDPHWVTIGVYRIINSSKTKNGHLNTSALGYILNEEQKFTYTLLEQRY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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