Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| SS Seq | CCCCCHHHSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC MHVMNCVSLVSDKENGNIATAPGFMIGQTPPPAPPPPPPPPPPSPPCSCSREECPSSPPPPPPPPLPGEPPIPPPPPGLPPTTHMNGYSHLGKKKRMRSFFWKTIPEEQVRGKTNSLRIEAMVLKKEFLPSCSSLYTDITVLRTAIKELMSCEELHSILHL |
1 | 7jjvA | 0.07 | 0.05 | 2.01 | 1.03 | SPARKS-K | | -MQCDGLDGADGTSNGQAGAGPNCNGGKGGKGAPGVGTAGGAGGVGGAGGTGNTNGAGGAGAAGGAAGAGTGGTGGNGGAGKPGGAPGAGGAGTPAGSA--GSPGQTTVL--------------------------------------------------- |
2 | 6govX | 0.06 | 0.06 | 2.68 | 1.32 | MapAlign | | IAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQAVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQLEIEEMQLKQAKKDLSEELQILEAGLFSRIRAVL |
3 | 1vt4I3 | 0.05 | 0.05 | 2.34 | 0.74 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5i2aA1 | 0.05 | 0.05 | 2.34 | 0.60 | EigenThreader | | YANRYAKMAEEMAEKETDLLTIARVCKNVPEFPAESPGRGSLTREYAQELIDCIWVKLNDLNKGFAGYSLFQLTRTGIGLPGATMDEARNYPGKSIQTGNVESFQSFDEFMEAYRKQMLYNIELMVNADNAIDYAHAKLAESCLVANVADSLYTIKKLVFE |
5 | 5mrcT | 0.18 | 0.14 | 4.47 | 0.48 | FFAS-3D | | --------------------------TKFTKPKPKQPVLPKDKIRPPTQLTHHSNNLRITEPIPPTTSNLRCPDDHPLFSNKKFIRSADDLPPSSHIRP--W---SIPELRHKSDLHSLWYNCLREQNHDEFSELSNSIRTTMWQIRHVLNERELA----- |
6 | 5lj3W | 0.07 | 0.07 | 2.78 | 0.94 | SPARKS-K | | MKFTPIVIDAPQYYVDHFNGKYNVDKCVILRDLQLETDS-------ESMPSSLKHLTHILDLTNNDLIMIPDLSRRDDIHGRNNIVEVDGRLLPMNVQNLTLSNNSIRRFEDLQRLRRA-PRTLKNLTLIGNQ--VCHLANYREHVLRLVPHLETLDFQNV |
7 | 3o4xE | 0.26 | 0.07 | 2.30 | 0.62 | CNFpred | | ------------------------------------------------------------------------------------------------------------------LRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLEL |
8 | 7jg5d | 0.06 | 0.04 | 1.63 | 0.83 | DEthreader | | -----------------------------------------------------FAIAIIWVV--------PVTLRNQQERLASAEKKDADMHKADAESETEKQDSERIAAQLSEQAGSEAERIKAQGAQQIQLMRQQLIRQLRTGLGAEAVNKAAEIVRAH |
9 | 7kifC | 0.09 | 0.09 | 3.34 | 1.29 | MapAlign | | AAPLFVTAEFINNNTGEIKSQTVFMINGTERVVVSQLVRSPGVYFDETIDKSTDKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSEQIVERLTEEDVVATIEYLVRLHENRRLRTVGELIQNQIRVGMSRMERVVRERMTT-- |
10 | 2kr0A | 0.14 | 0.14 | 4.63 | 0.74 | MUSTER | | LGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPT--QPIQLSDLQSILATMNVPAGPAGGQQVDLASVL-------PEIMAPILANADVQERLYL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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