Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCCCSSSSCCCCSSSSSCCHHHHHCCCCCCCSSSCCCCSSSCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MGGSASSQLDEGKCAYIRGKTEAAIKNFSPYYSRQYSVAFCNHVRTEVEQQRDLTSQFLKTKPPLAPGTILYEAELSQFSEDIKKWKERYVVVKNDYAVESYENKEAYQRGAAPKCRILPAGGKVLTSEDEYNLLSDRHFPDPLASSEKENTQPFVVLPKEFPVYLWQPFFRHGYFCFHEAADQKRFSALLSDCVRHLNHDYMKQMTFEAQAFLEAVQFFRQEKGHYGSWEMITGDEIQILSNLVMEELLPTLQTDLLPKMKGKKNDRKRTWLGLLEEAYTLVQHQVSEGLSALKEECRALTKGLEGTI |
1 | 7ctpA | 0.22 | 0.16 | 4.91 | 0.83 | DEthreader | | QHAE----------------E--QF--ED-QYGVALFNSMRHEIEGTGL-PQAQLLW--RKVPLDE--RIVFSGNLFQHQEDS-KWRNRFSLVPHNYGLVLYENKAAY-ERQVPPRAVINSAYKILTSVDQYLELIGNS-LPGT-TAK-------LKCPTQFPLILWHPYARHYYFCMTEDKWQAVLQDCIRHCNNG--IPE--DSKVEGPAFTDAIRMYRQSKEYGTWEMLCNEV--L---V--E----------------------------------R--EV--SKVQQVQPAMQAVIRTDMD--- |
2 | 7ctpA | 0.38 | 0.36 | 10.75 | 3.32 | SPARKS-K | | -GDVLSTHLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWRKVPL-DERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIGNSLPGTTAKLK---------CPTQFPLILWHPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQVQPAMQAVI |
3 | 7ctpA | 0.37 | 0.36 | 10.66 | 1.55 | MapAlign | | -GDVLSTHLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWRKVPL-DERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIGNSLPGTT---------AKLKCPTQFPLILWHPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQVQPAMQAVI |
4 | 7ctpA | 0.37 | 0.36 | 10.66 | 1.33 | CEthreader | | -GDVLSTHLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWRKVP-LDERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIGNSLPGTTAK---------LKCPTQFPLILWHPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQVQPAMQAVI |
5 | 6bbpA | 0.12 | 0.10 | 3.68 | 0.53 | MUSTER | | VRDKPTA---ERFITMNRGINE---GDL-----EELLRNLYESIKNPFKIPEDDGNDLTHTFFNPD-----REGWLLKLGGRVKTWKRRWFILT-DNCLYYFEY----TTDKEPRGIIPLENLSIR------------EVEDPRKPNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI-SRDPFYDMLATRKRRIANKKGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLPTVGFNVET-DVGGLDKIRPLWRHYYTGTLIFVVDCADRRIDEARQELHRIINDREMRD |
6 | 7ctpA | 0.38 | 0.36 | 10.75 | 7.90 | HHsearch | | -GDVLSTHLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWRKVPL-DERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIGNSLPGTTAK---------LKCPTQFPLILWHPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQVQPAMQAVI |
7 | 7ctpA | 0.38 | 0.36 | 10.75 | 3.00 | FFAS-3D | | -GDVLSTHLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWRKVPL-DERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIGNSLPGTTAK---------LKCPTQFPLILWHPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQVQPAMQAVI |
8 | 7ctpA | 0.29 | 0.28 | 8.56 | 1.37 | EigenThreader | | -GDVLSTHLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWR-KVPLDERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIG-----------NSLPGTTAKLKCPTQFPLIPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKE-LYGTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQVQPAMQAVI |
9 | 7ctpA | 0.38 | 0.36 | 10.75 | 3.03 | CNFpred | | -GDVLSTHLDDARRQHIAEKTGKILTEFLQFYEDQYGVALFNSMRHEIEGTGLPQAQLLWRKVPLD-ERIVFSGNLFQHQEDSKKWRNRFSLVPHNYGLVLYENKAAYERQVPPRAVINSAGYKILTSVDQYLELIGNSLPGTTA----------LKCPTQFPLILWHPYARHYYFCMMTEAEQDKWQAVLQDCIRHCNNGIPEDSKVEGPAFTDAIRMYRQSKELYGTWEMLCGNEVQILSNLVMEELGPELKAELGPRLKGKPQERQRQWIQISDAVYHMVYEQAKARFEEVLSKVQQVQPAMQAVI |
10 | 5xsyA | 0.06 | 0.04 | 1.81 | 0.83 | DEthreader | | ----------SYMVFFIMVIFLGSFYLINLILAVVAMAYEEQNQATLAEAQEKE-------------------KKWV---------HFVMMD-------PFT-----------D-LFITL-I---------LN-TLFMSIEHHPMNEQSLLSAGNLVTTIFAAEM----------VLKIIPYYYFQQTWNIFKAKLNILIKI--------LVMLNLFLA----FVIVFAFTLNLFIGVII-----EITTSAGWDG-LLLPTCGNPGKGITFFCSYIILSFLVVVNMYIAIILENFGVAQEESS------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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