Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCSSSCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSSSSCCCCSSSSSSSCCCCCCCSSSSSSCCCSSSSSSSSSSSSSSCCSSSSSSCCSSSSSSCCCCCSSSSSCCCSSSSSSSSCCCSSSCCCSSSSSSCCCCCCSSSSSSSCCCCCCCCCSSSSSSSSCCCCCSSSSSSSSCCCSSSSSSCCCCSSSSSCCCCCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCCCSSSSCCCHHHHHHCCCCCCCCCCCCC EEMLDLRGAERCQKGGCVPGRPMGPPRRRCLPAASGPGADVSLWNILRNNIGKDLSKVSMPVQLNEPLNTLQRLCEELEYSSLLDQASRIADPCERMVYIAAFAVSAYSSTYHRAGCKPFNPVLGETYECERPDRGFRFISEQVSHHPPISACHAESENFAFWQDMKWKNKFWGKSLEIVPVGTVNVSLPRFGDHFEWNKVTSCIHNVLSGQRWIEHYGEVLIRNTQDSSCHCKITFCKAKYWSSNVHEVQGAVLSRSGRVLHRLFGKWHEGLYRGPTPGGQCIWKPNSMPPDHERNFGFTQFALELNELTAELKRSLPSTDTRLRPDQRYLEEGNIQAAEAQKRRIEQLQRDRRKVMEENNIVHQARFFRRQTDSSGKEWWVTNNTYWRLRAEPGYGNMDGAVLW |
1 | 7deiA | 0.65 | 0.60 | 17.01 | 1.50 | DEthreader | | -------------------------RRRTSLPAPSPS--SS-NISLWNILRNNKLSKVAMPVELNEPLNTLQRLCEELEYSELLDKAAQIPSPLERMVYVAAFAISAYASSYYRAGSKPFNPVLGETYECIREDKGFQFFSEQVSHHPPISACHAESRNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHYGEIVIKNLHDDSCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCGGGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKSD-----GSWVSNGTYLELRKDLGFSKLDHPVLW |
2 | 7deiA | 0.68 | 0.63 | 17.95 | 6.31 | SPARKS-K | | -------------------------RRRTSLPAPSPSSSNISLWNILRNNIGKDLSKVAMPVELNEPLNTLQRLCEELEYSELLDKAAQIPSPLERMVYVAAFAISAYASSYYRAGSKPFNPVLGETYECIREDKGFQFFSEQVSHHPPISACHAESRNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHYGEIVIKNLHDDSCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCGGGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKSDGS-----WVSNGTYLELRKDLGFSKLDHPVLW |
3 | 5h2dA | 0.35 | 0.33 | 9.86 | 2.26 | MapAlign | | --------TKAKVLLEEGSFLGYEDKLRQRLKLGKDDRPSVSLWSVLKSMVGKDMTRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTV-KRVAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTESPKWDFFGESFVDSKFNGRSFDFKHLGLWYLTIRDKEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNHN-TGDYCMIHFKARGS----AYEVKGEVYNAKGGKEWIFGGRWNESVSAKKVGTRFNVWHVNERP----EFPFLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHVTKCDYWKFNGEYWKQRRDHKLADE-GDIF- |
4 | 5h2dA | 0.34 | 0.33 | 9.95 | 1.46 | CEthreader | | --STAEQKTKAKVLLEEGSFLGYEDKLRQRLKLGKDDRPSVSLWSVLKSMVGKDMTRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTVKR-VAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTESPKWDFFGESFVDSKFNGRSFDFKHLGLWYLTINGKEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNHN-TGDYCMIHFKARG----SAYEVKGEVYNAKGGKEWIFGGRWNESVSAKKVLTRFNVWHVNERPE---FPFNLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHVTKCDYWKFNGEYWKQRRDHKLADE--GDIF |
5 | 5h2dA | 0.35 | 0.34 | 10.21 | 3.86 | MUSTER | | STAEQKTKAKVLLEEGSFLGYE--DKLRQRLKLGKDDRPSVSLWSVLKSMVGKDMTRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTVKR-VAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTESPKWDFFGESFVDSKFNGRSFDFKHLGLWYLTIRPDEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNH-NTGDYCMIHFKARG----SAYEVKGEVYNAKGGKEWIFGGRWNESVSAKKVLKPFNVWHVNERP---EFPFNLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHPTKCDYWKFNGEYWKQRRDHKLADE--GDIF |
6 | 7deiA | 0.68 | 0.63 | 17.81 | 5.10 | HHsearch | | -------------------------RRRTSLPAPSPSSSNISLWNILRNNIGKDLSKVAMPVELNEPLNTLQRLCEELEYSELLDKAAQIPSPLERMVYVAAFAISAYASSYYRAGSKPFNPVLGETYECIREDKGFQFFSEQVSHHPPISACHAESRNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHYGEIVIKNL-HDSCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCGGGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKS-D----GSWVSNGTYLELRKDLGFSKH--PVLW |
7 | 7deiA | 0.68 | 0.63 | 17.95 | 4.28 | FFAS-3D | | -------------------------RRRTSLPAPSPSSSNISLWNILRNNIGKDLSKVAMPVELNEPLNTLQRLCEELEYSELLDKAAQIPSPLERMVYVAAFAISAYASSYYRAGSKPFNPVLGETYECIREDKGFQFFSEQVSHHPPISACHAESRNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHYGEIVIKNLHDDSCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCGGGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKSDGS-----WVSNGTYLELRKDLGFSKLDHPVLW |
8 | 7deiA | 0.54 | 0.49 | 14.01 | 1.77 | EigenThreader | | --------------------------RRRTSLPAPSPSSSNISLWNILRNNIGKDLSKVAMP--VELLNTLQRLCEELEYSELLDKAAQIPSPLERMVYVAAFAISAYASSYYRAGSKPFNPVLGETYECIREDKGFQFFSEQVSHHPPISACHAESRNFVFWQDVRWKNFWGKSMEIVPIGTTHVTLPV-FGDHFEWNKVTSCIHNILSGQRWIEHYGEIVIKNLHDDSCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYCGG-GSSSAVWRANPMPKGYEQYYSFTQF--ALELNEMSKSLLPPTDTRFRPDQRFLEE-GNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKS---DGSWVSN--GTYLELRKDLGFSKLDHPVLW |
9 | 7cyzA | 0.67 | 0.56 | 16.07 | 5.28 | CNFpred | | ----------------------------------------------------------AMPVELNEPLNTLQRLCEELEYSELLDKAAQIPSPIERMVYVAAFAISAYASSYYRAGSKPFNPVLGETYERIREDKGFQFFSEQVSHHPPISACHAESRNFVFWQDVRWKNKFWGKSMEIVPIGTTHVTLPVFGDHFEWNKVTSMIHNI-SGQRWIEHYGEIVIKNLHDDSCYCKVNFIKAKYWSTNAHEIEGTVFDRSGKAVHRLFGKWHESIYMGGGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGNLEEAEIQKQRIEQLQRERRRVLEENHVEHQPRFFRKSD----DDSWVSNGTYLELRKDLGFSKLDHPVLW |
10 | 5h2dA | 0.33 | 0.31 | 9.24 | 1.33 | DEthreader | | ---------------E-GSFLGYEDKLRQRLKLGKD-DRPSVSLWSVLKSMVGKDMRMTLPVSFNEPTSLLQRVAEDLEYADLLNQAASFEDSTLRLLYVAIFTVSSYASTVK-RVAKPFNPLLGETFEYSRPDKSYRFFTEQVSHHPPISATWTESPKWDFFGESFVDSKFNGRSFDFKHLGLWYLTIRPKEELYTYKKPNNQVVGILLGNPQVDNYGDVKIVNHN-TGDYCMIHFKARGS----AYEVKGEVYNAKGGKEWIFGGRWNESVSAKKVGTRFNVWHV-NE-RP-EFPFNLTKFAVTLNAPQPHLLPWLPPTDTRLRPDQRAMEEGRYDEAATEKHRVEERQRSVRKKREEKNITYQQRWFKKEIHPTKCDYWKFNGEYWKQRRDHKLA-DE-GDIF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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