>Q9BY42 (306 residues) MGCDGGTIPKRHELVKGPKKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKD AVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFI CPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVD VLKTRMEERRLRAKLEKKTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKT NLAPKSTAMNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEESAHWVT HTSYCF |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | MGCDGGTIPKRHELVKGPKKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAKLEKKTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTAMNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEESAHWVTHTSYCF |
Prediction | CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCSSSCCCCCSSCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCSCCCCCCSSSSCCCCCSCHHHHHHHHCCCCCCCCCCCCCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 998887643067876345652113845776506666744258789983776999734579999999715778777530012334443101353227655566554455544444566124776550348960189982897410599999723356877797256677588299878999999999999998777775310334433101001102344210101344333322233334445555555555544333220011111103623302333225788510013566777644688779 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | MGCDGGTIPKRHELVKGPKKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAKLEKKTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTAMNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEESAHWVTHTSYCF |
Prediction | 841220101314401454544653456444424042110044204400000330200115200510163555664464153044043115041441454656655444544454651301000033413641300000100000024005405753134235514662103031676226404631554425544554544555566454554555554455455554655555555555544545554544455445545444554434566345314421455654556566413200223126 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCSSSCCCCCSSCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCSCCCCCCSSSSCCCCCSCHHHHHHHHCCCCCCCCCCCCCCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC MGCDGGTIPKRHELVKGPKKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKAASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLRCCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAKLEKKTKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTAMNESSSGKAGKPPCGATKRSIADSEESEAYKSLFTTHSSAKRSKEESAHWVTHTSYCF | |||||||||||||||||||
1 | 4wz3B | 0.17 | 0.08 | 2.81 | 1.10 | FFAS-3D | ---------------RNPFDIDHKSKYLREAALEATCPIDSGFLKDPVI-TPEGFVYNKSSILKWLETKKEDPQSPELLIIVNRFVETQTNYEKLKNRLVQNARVAARQKEYTEIPDIFLCPISKTLIK----TPVITAQGKVYDQEALSNFATGNKDETGKKLSIDDVVVF-------DELYQ-------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 4wz3B | 0.17 | 0.08 | 2.46 | 1.19 | CNFpred | --------------------------------TMLTCPIDSGFLKDPVITP-EGFVYNKSSILKWLETKKEDPQSRKPLT-PELLIIVNRFVET-KNRLVQNARVAARQKEYTEIPDIFLCPISKTLIK----TPVITAQGKVYDQEALSNFLTGNKDETGKKLSIDDVVVF-------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 4wz3B | 0.15 | 0.08 | 2.63 | 3.57 | HHsearch | -RNPFDIDHKSKYLREAALEANLSHP---ETTPTLTCPIDSGFLKDPVITP-EGFVYNKSSILKWLETKKEDKPFPELLIIVNRKNRLVQN--ARVAARQKE---------YTEIPDIFLCPISKTLIKT----PVITAQGKVYDQEALSNFLTGNKDETGKKLSIDDVVVFDELYQ--------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 6wi7A | 0.10 | 0.07 | 2.42 | 0.85 | CEthreader | KTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC--PTCRKKLVSKRSLRPDPNFDALISKIYPSRTTRIKITELNPHL-MCVLCGGYF---IDATTIIECLHSFCKTCIVRYLSKYCPICDVQVKTRPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPS---------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 5oqjW | 0.07 | 0.05 | 2.04 | 0.72 | EigenThreader | -----------------------------PIDDIVKNLLKFVVRGFYG------GSFVLVLDAILFHDDLKQLLSTELGPLIARLRSDRLISIHKQEYPPNSKS-----------VERVYY----YVKNSEPNGYMCPICLTKYTQLEAVQLLNFLCSLCDEPL----VEDDSGKKNKEKQDKLNRLMDQIQPIIDSLK----KIDDSRIGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEDE----FEDVT | |||||||||||||
6 | 4epoG | 0.17 | 0.07 | 2.37 | 0.57 | FFAS-3D | --------------------QEHWALMEELNRSKK----------------------DFEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMN--------------------DVLENELQCIICSEYFIE----AVTLNCAHSFCSYCINEWRKIECPICRKDILVLDN----CINKMVNNLSSEVKERRIVLIRERKAKR--------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4wz3B | 0.16 | 0.08 | 2.82 | 0.77 | SPARKS-K | ----RNPFDIDHKSKYLREAALEANLSHPETTPTLTCPIDSGFLKDPVIT-PEGFVYNKSSILKWLETKKEDPQSAKDLQPFPELLIIVLKNVQNARVAARQKEYTEIPD-------IFLCPISKTLIKT----PVITAQGKVYDQEALSNFLIANKDETGKKLSIDDVVVF-------DELYQ-------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 2w8nA | 0.09 | 0.04 | 1.62 | 0.76 | CNFpred | -----------------------------ITRKVGAALAA----GCTVVVKPAEDTPFSALALAELASQA-RKNAKEVGEAICTDPLVSKISFTGSTT-----TGKILLHHAANSVKRVSMELGG------LAPFIVFDS--ANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRHDAFVKAFAEAMKKNLRV------------------------------------------------------------------------------------------------------------------ | |||||||||||||
9 | 4yddA | 0.07 | 0.04 | 1.76 | 0.67 | DEthreader | --------------------------------VN-CTGACP---------ISVYSPVP--AV------------SPVSFSAGHRFAHHAHTYDHPTGQ-TLWGSSISYNSICGGGTQHWYY-------IG-------QRFCQTTITYIHAEVN--RSIPNEQGRDPKVFFVGWLNDSTALYSDVVLI-LARVEMAAKRKKYE-F-----------------------------------------HDTFFDMGVELPTYKAPI-RFNSIEMSAIVEAWNHGKVICRVLMDLLTGGSQSVCPQRDVR | |||||||||||||
10 | 6wi7A | 0.09 | 0.05 | 2.01 | 0.92 | MapAlign | ------LYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLK-NTMTTKELHRFCADCIITAL-RSGNKECPTCRKK-LVSKRSLRPDNFDALISKIYPSRTTRI--KITELNPHLMCVLCGGYF---IDATTIIECLHSFCKTCIVRYLSKYCPICDVQVPLLNIRSDKT--LQDIVYKLLFKNEMKRRRDFYAA----------------------------------------------------------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |