Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CSSCCCCCCCCCCCCCCCCCCSCCSSSCCCCCCCCCCCCHHHHCCCCCCSSSSCCCCCCCCCCCHHHCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHHHHHHHCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCSCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCSCCCCCHHHHHCCCCCCSSSCCCCCCCCCCCCHHHCCCCCCCSSSCCCCCCCCCCHHHCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHCCCCCCCSSSCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCHHHHHCCCCCCSSSCCCCCCCCCCCHHHHHHHHHHCCCCSCCCCCCCSSCCCHHHCCCSSCCCCHHHC EILGLSGAKIQKSDFQKIAHLHLNTVFLGFRTLPHYEEGSLPILNTTKLHIVLPMDTNFWVLLRDGIKTSKILEMTNIDGKSQFVSYEMQRNLSLENAKTSVLLLNKVDLLWDDLFLILQFVWHTSVEHFQIRNVTFGGKAYLDHNSFDYSNTVMRTIKLEHVHFRVFYIQQDKIYLLLTKMDIENLTISNAQMPHMLFPNYPTKFQYLNFANNILTDELFKRTIQLPHLKTLILNGNKLETLSLVSCFANNTPLEHLDLSQNLLQHKNDENCSWPETVVNMNLSYNKLSDSVFRCLPKSIQILDLNNNQIQTVPKETIHLMALRELNIAFNFLTDLPGCSHFSRLSVLNIEMNFILSPSLDFVQSCQEVKTLNAGRNPFRCTCELKNFIQLETYSEVMMVGWSDSYTCEYPLNLRGTRLKDVHLHEL |
1 | 2a0zA | 0.16 | 0.15 | 5.14 | 1.50 | DEthreader | | NLSLSSQLTTSNTTFLGLTNLTM-LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSASLPKIDDFSFQWLKCLEHLNMEDNDIPG--IKS-NMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKI-SKI-ESDAF-SWL--GHLEVLDLGLNEIGQLTEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLALWIYFLKLSHLHILNLESNGFDEIPVEVFKLFELKIIDLGLNNLNTLPVFNNQVSLKSLNLQKNLITSVEKKVFGPARNLTELDMRFNPFDCTCSIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC |
2 | 4u7lA | 0.19 | 0.18 | 5.79 | 2.56 | SPARKS-K | | RSLNLSYNKLSPAGFEDLPNLQE--VYLNNNELTASLGAASSHV--VSLFLQHNK---IRSVEGSQLKAYLSLEVLDLSLNN---ITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLS--RSLLTLRLSKNRITQ---LPVRAF--KLPRLTQLDLNRNRIRLIE-----GLTFQGLNSLEVLKLQRNNISKLTDGWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARI-HRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAFKGL-RSLRVLDLDHNEISGTIEAFSGLDSLSKLTLFGNKIKSVAKRSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQ---AFVTATCAHPESLKGQSIFSVPPESF |
3 | 4u7lA | 0.16 | 0.15 | 4.97 | 0.63 | MapAlign | | DSLDCGGGLAALPGDL-PS--STRSLNLSYNKLSEIDPAGFELPNLQEVYLNNN-ELTAVPSLGAASSHVVSLFLQHNKI------RSVEGSQLKAYLSLEVLDLSLNNITE--VR--NTCFHGPPIKELNLAGNRIG--TLELG-AFDGLSRSLLTLRLSKNRITQLPV-----R-AFKLPRLTQLDLNRNRIRLIEGFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSG-SLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLLSSLSVLRLSHNSISHIAEGAFGLRSLRVLDLDHNEISIEGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRS--VQFDAFVK--MKNLKELHI--SSTCAHPESLKGQSIFSVPPESF |
4 | 4u7lA | 0.18 | 0.17 | 5.49 | 0.38 | CEthreader | | RSLNLSYNKLSEIDPAGFEDLNLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITE------VRNTCFPHGPPIKELNLAGNRIGTLELGAF--DGLSRSLLTLRLSKNRITQLPV-----RAFKLPRLTQLDLNRNRIRLIE-----GLTFQGLNSLEVLKLQRNNISKLTDGWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARIH-RKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKRSLRVLDLDHNEISGTIEDTSGLDSLSKLTLFGNKIKSVAAFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFV---TATCAHPESLKGQSIFSVPPESF |
5 | 4u7lA | 0.18 | 0.17 | 5.49 | 1.85 | MUSTER | | RSLNLSYNKLSEIDPAGFEDLNLQEVYLNNNELTA-VPSLGAASS--HVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLN-NITEVR--NTCFPHGPPIKELNLAGNRIGT-LELGAFDGL-SRSLLTLRLSKNRIT---QLPVR--AFKLPRLTQLDLNRNRIRLIEGLTFQ-----GLNSLEVLKLQRNNISKLTDGWGLSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARI-HRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFKRSLRVLDLDHNEISGTIEDFSGLDSLSKLTLFGNKIKSVAKRSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRML---QAFVTATCAHPESLKGQSIFSVPPESF |
6 | 4lxrA | 0.15 | 0.14 | 4.80 | 1.03 | HHsearch | | ESIEFGSNKLPRGIFGKMPKLKQ--LNLWSNQLHNLTKHDFEGATSLGIDIHDNG---IEQLPHDVFAHLTNVTDINLSANL---FRSLPQGLFDHNKHLNEVRLMNNRVPATLPSRLFAFEHSTQITNISLGDNLLKT---LPATLLE-HQVNLLSLDLSNNRLTH--LPDS---LFAHTTNLTDLRLEDNLLTGISGDINLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGLAFLPMQLMELHLENNTLLRLPSANTPYESVTSLHLAGNNLTSIDVDQLPTNLTHLDISWNHLQMLNATVLGFL-NWRSVKLSGNPWMCDCTAKPLLLFTQDNFERIGD-RNEMMCVNAPRMVELSTNDICP--- |
7 | 3j0aA | 0.22 | 0.21 | 6.65 | 2.06 | FFAS-3D | | ERLLLSFNYIRTVTASSFPFLQLQLLELGSQYTPLIDKEAFRNLP--NLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLASLILAHHIMGAGFGFHNIKLARSSVRHLDLSHGFVFSLNSR-----VFETLKDLKVLNLAYNKINKIAAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAII-QDQTFKFLEKLQTLDLRDNALTTSGDQTPSENPSLEQLFLGENMLQLAWETELLSHLQVLYLNHNYLNSLPPGFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPD---VFVSLSVLDITHNKFICECELSTFINWLNHTNVTIAGPPADIYCVYPDSFSGVSLFSLSTE-- |
8 | 3a79A | 0.14 | 0.13 | 4.52 | 0.97 | EigenThreader | | SDNHLSSLSSSWFGPL-SSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVFSEIRRID--FAGLTSLNELEIKALSLRNYQSQSLK------SIRDIHHLTLHL--SESAFLLEIFADIL-SSVRYLELRDTN--LARFQFSPLPVDEVSSPMKKLAFRGSVL-TDESFNELLKLLRYILELEVEFDDCTLGDFNPSSELGKVETVTILHIPQFYDLSTVYSLLEKVKRITVSKVFLVP---CSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPTLVLSQNHLRSGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVVKTCI-PQTLEVLDVSNNNLDSFSL----FLPRLQELYISRNKLKTLPDA------SLFPVLLVMKIASNQLWLHTN--PWDCSCPRIDYLS |
9 | 3cigA | 0.18 | 0.18 | 5.76 | 10.76 | CNFpred | | QNLSLANNQLLATTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPLRYLSLEYN---NIQRLSPRSFYGLSNLRYLSLKRAFTKSHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFT---GLVSLKYLSLSKTFTS-LQTLTNETFVSLHSPLLTLNLTKNHISKIAN-----GTFSWLGQLRILDLGLNEIEQKLEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDSPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLAR-FLKGL-SHLHILNLESNGLDEIPVGVFNLFELKSINLGLNNLNKLEPFDDQTSLRSLNLQKNLITSVEKDVFGPPQNLNSLDMRFNPFDCTCEISWFVNWINQTHTNISELSTHYLCNTPHHYYGFPLKLFDTSSC |
10 | 4u7lA | 0.17 | 0.16 | 5.23 | 1.33 | DEthreader | | SSLNLNKLEIDPAGFEDLPNLQE-VYLNNNELTAVPSLGAASSHVV-SLFLQHNKIRSVEGSQLKAYLSLEVLDLSLN-----NITEVRNTCFPHGPP-IKELNLAGNRIGTLE-LGAFDG-LSRSLLTLRLSKNRIT--Q-LPVRAFKL--PRLTQLDLNRNRI-RL-IEGL-T--FQGLNSLEVLKLQRNNISKLTGAFWGSKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNNSIARI-HRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISHIAEGAFLRSLRVLDLDHNEISGTTSGAFSLDSLSKLTLFGNKIKSVAKFSGLEGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAF-VT--ATCAHPESLKGQSIFSVPPESF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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