Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC MFARGLKRKCVGHEEDVEGALAGLKTVSSYSLQRQSLLDMSLVKLQLCHMLVEPNLCRSVLIANTVRQIQEEMTQDGTWRTVAPQAAERAPLDRLVSTEILCRAAWGQEGAHPAPGLGDGHTQGPVSDLCPVTSAQAPRHLQSSAWEMDGPRENRGSFHKSLDQIFETLETKNPSCMEELFSDVDSPYYDLDTVLTGMMGGARPGPCEGLEGLAPATPGPSSSCKSDLGELDHVVEILVET |
1 | 6dehA | 0.09 | 0.09 | 3.46 | 0.46 | CEthreader | | NNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDYQKAAEYFEKAANQGHAKSQLELGYLYDSGKLGKSDLQGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQLGIYYRDGIGVAADPVKAYAWFTAAKNNGFEKAASNASDLEKSMNPEDLSKARILGQQYTDNYKA |
2 | 6b8hb | 0.06 | 0.05 | 2.06 | 0.60 | EigenThreader | | QTDPKAKANSIINAIPGN----NILTKTGV------------------LGTSAAAVIYAISNE----------------LYVINDESILLLTFLGFTGLVAKYLAPAYKDFADARMKKVSDVLNASRNKHVEAVDRIDSVSQLQNVAETTKVLFDVSKETVELESEAFELKQKVELAHEAKAVLDSWVRYEASLRQLEQRQLAKSVISRVQSELGNPKFQEKVLQQSISEIEQLLSK---- |
3 | 3l6wA1 | 0.10 | 0.08 | 3.10 | 0.44 | FFAS-3D | | -----VRKNIHSLSHH----------------EAEELRD-ALYKLQNDESHGGPHWHRLHTI--QFERALKKHGSHLGIPYWDWTQTISSLPTF----------FADSGNNNPFFKYHIRSINQDTVRDVNEAIFFSSIFYLALQALEEDNYCDFEVQYEILHNEKYSMSTLEYSAFDPYFASLD-KIWIIWQECAGDIMHVPLHPFNYESVNNDDFTRENSLPNVDSHRFNYKYDNLLHG |
4 | 4btgA3 | 0.12 | 0.11 | 3.99 | 1.06 | SPARKS-K | | LQFTRTFSASMTSELLWEAYVYRVGRTATYPVVSSVLTILGRLWSPSTPKELDPSLRNTQLRSNLALAYQDMVKQRGRAEVIF--------SDEELSSTIIPWFIEAMSEVSPFKLRPINEDWQFAKEITAFTPVKLANNSNQRFLDVEAPIGNTRGTVNGAEMTLGFPSVRASNDLKRSMFNYQGSLYLVIPVGYNAIEGGSIRTPEPLEAYNKPIQPSEVLQAKVLDLANHTTSIHIWP |
5 | 2fji1 | 0.06 | 0.04 | 1.59 | 0.49 | CNFpred | | ------------------------------QKNWISKISEEIKKQINYDECPGGLVEYLIAVSNDQMKAADYAV-------------------------AISSKYGKLV-----------------------------------------SKVYEKQITNHLEGTLDGFAEVAQCSSLGLITLMF---DDLRKPYQEIFS-KTWYMGSQAQQIADTLDEYLLDIKPQMNLFVNFIDNVIGE |
6 | 6r9tA | 0.09 | 0.07 | 2.54 | 0.83 | DEthreader | | AAAAIPLLVQGVRGSQAQ-PDSPSALALASQSFLQPGGKMVAAAKASVPTIQQAMLSCAKNLGTALAELRTAAQKAQEACPEARDAGGS-------A------QPDMSQAYLVGVSD--PNSQ--AQISPEGRAAMPSMRDKAP-Q------L-CETAIASMAQYFEPLTAAVLTGMDSTQAINQASEAKPAAVAAEN---------SHVLAAL-A------------------------- |
7 | 6mixA3 | 0.07 | 0.07 | 2.79 | 0.82 | MapAlign | | PRPRHNDRLRLLLPVPHVKLNVQGVSSQDCIAAALACSKILKELS-KEEEDTDSSEEMLALAEEYEHRAIGVFEERAQKLLTRVSEAWGKTTCLQLALEAKDMKFVSHGGIQAFLTKVWWGQLSVDNGLWRVTLCMLAFPLLLTGLISFREKRLQDVGTPAARARAFFTAPVVVFHLNILSYAKQAILIHNERRVDWLFRGAVYHSYLTIFGQIPGYIDGFPEWLTVLLLCLYLLFTNILL |
8 | 6etxG | 0.11 | 0.11 | 4.02 | 0.71 | MUSTER | | RWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSEGGSLAAKQCLLNGAPELAADWRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDLYALDVLLTVLI-S |
9 | 2pffB | 0.14 | 0.14 | 4.66 | 0.41 | HHsearch | | FIASQLTEGFAADDEPTTGKFLSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNTTLVKHVLVGDLIKFSAETLSELKVFQGLNPSNTP--DKDYLLSIPISCPTPGE-LRSYSQGTDSFSVALFCYEAYPNTSLPPSPSPSISNL-----TQEQVQDKTNSHLPAGKQVEISGPLNLTLRLDQSRIPFSERKLKFSNRASPFLLVPKDLVKNNVSFNAKDIQIPVSDLRVLDCIIRLPVKW |
10 | 1vt4I | 0.09 | 0.09 | 3.35 | 0.39 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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