>Q9BXJ8 (237 residues) LYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAAFNF LLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTWPDGLMYQKFRNQFLSF SMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQ LFNALTLFNLAQDPQCKEWQVLMCGFPFLLLFLGNFFTTLRVVHHKFHSQRHGSKKD |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | LYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTWPDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAQDPQCKEWQVLMCGFPFLLLFLGNFFTTLRVVHHKFHSQRHGSKKD |
Prediction | CSSSSSSCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSSCCSCCSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC |
Confidence | 834676434234645734557789999999999999999999999998647899999999999999841111021122499898425468899999961434699966899999999999999999999999999878999998557877516772311111034012677999999999999999978761667762289999999999998379999999999986244312479 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | LYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTWPDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAQDPQCKEWQVLMCGFPFLLLFLGNFFTTLRVVHHKFHSQRHGSKKD |
Prediction | 530200013120402467322402630350102000000132211233133211100000001211000314430032246404111010000001000010212434204402320010000200011013324441022031135544020213424233343121100312311211112011001103345044010000131023013113300020024214545656678 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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SS Seq | CSSSSSSCCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSSCCSCCSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LYLSLVLGNVNVTLLSKQAKFAYKDEYEKFKLYLTIILILISFTCRFLLNSRVTDAAFNFLLVWYYCTLTIRESILINNGSRIKGWWVFHHYVSTFLSGVMLTWPDGLMYQKFRNQFLSFSMYQSFVQFLQYYYQSGCLYRLRALGERHTMDLTVEGFQSWMWRGLTFLLPFLFFGHFWQLFNALTLFNLAQDPQCKEWQVLMCGFPFLLLFLGNFFTTLRVVHHKFHSQRHGSKKD | |||||||||||||||||||
1 | 3rkoB | 0.12 | 0.11 | 3.90 | 1.09 | CNFpred | ATLMLLGGAGKSAQLP---QTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV-------QAWDAAIFHLMTHAFFKALLFLASGSVILACH-----HEQNIFMGGLRKIPLVYLCFLVGGAALSATAGFFSKDEILAGAMANHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTH | |||||||||||||
2 | 6y7fA | 0.08 | 0.06 | 2.51 | 1.00 | DEthreader | -L-----------MRKPFELKKAMITYNFFIVLFSVYMCYEFVMSGGIGYDSSTALRMARTCWLYYFSKFIELLDTIFVLKVHVFHHTIMPWTWWFGVKFAA----------GG-LGTFHALLNTAVHVVMYSYYGLSALGP-AY--------Q-K-Y--L--WWKKYLTSLQLVQFVIVAIHISQFFFM--EDCKYQ-FP-VFACIIMSYSFMFLLLFLHFWYRAYTKGQRL---- | |||||||||||||
3 | 3vvnA | 0.09 | 0.09 | 3.39 | 0.56 | CEthreader | GIIALAAGLGVGTSGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGAEAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPYTLGFGVVGAAYATLLSMVVTSLFIAYWLFVKRDTYVDITLRDFVAITAGGENGVAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFTAQ | |||||||||||||
4 | 5vmsA | 0.06 | 0.06 | 2.53 | 0.93 | EigenThreader | TNIQGRVYNFLERPTGWKCFVYH--------FTVFLIVLICLIFSVLSTIQQETLFWMEIVLVVFFGAEYVVRLWSAGCRSKYRLRFARKDLIVVVASVIVLCVGSAI-------RGIRFLQILRMLHVDFLGLIFSSYFVYLAEKGEYQFGSYADALWWGVVTVTTNRQIPAAASLIQTAWRCYAAENPDSATWKIEHHRAAIKVIRRMQYFVAKKKFQQARKLMVRIKELQRRLD | |||||||||||||
5 | 6y7fA | 0.14 | 0.13 | 4.29 | 0.97 | FFAS-3D | FYVYFVT-SLGPKLMENRKPFELKKAMITYNFFIVLFSVYMCYEFVMSGSRSPTALRMARTCWLYYFSKFIEDTIFFVLRKKVTFLHVFHHTIMPWTWWFGVKFAAGGLG-------TFHALLNTAVHVVMYSY-----YGLSALGPAYQKYL--------------WWKKYLTSLQLVQFVIVAHISQFFFMEDCK--YQFPVFACIIMSYSFMFLLLFLHFWYRAYTKGQRLPK- | |||||||||||||
6 | 6y7fA | 0.14 | 0.12 | 4.04 | 0.83 | SPARKS-K | TILLGFYVYFVTSLGPKLMENRKPFELKKAMITYNFFIVLFSVYMCYEFVMTALRMARTCWLYYFSKFIELLDTIFFVLRKKVTFLHVFHHTIMPWTWWFGVKFAAG------GLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWW--------------------KKYLTSLQLVQFVIVAIHISQFFFMKYQFCIIMSYSFMFLLLFLHFWYRAY--------TKGQRLPK- | |||||||||||||
7 | 3rkoC | 0.09 | 0.07 | 2.78 | 1.05 | CNFpred | --------------------ITAATKFFIYTQASGLVMLIAILALVFVHYTFNYEELLNTPMEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLA----GILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGI--------FYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQ------LAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGG | |||||||||||||
8 | 3l39A | 0.05 | 0.04 | 1.83 | 1.00 | DEthreader | --------------TPK-EPK-FFPLLKQLSDVLSASSVLLVESME--HDLPTERADYYKQIKDMEREGDRLTHLIFDELIHDASCMDDVIDGINSSAKRIVIYNPR--PIS--ESGKELSRLIHEEAINIGKAMDELE-T----------------FRKN-PKPLRDYCTQLHDIENQADDVYELFITKLFEKDCILIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS------- | |||||||||||||
9 | 3dqbA | 0.06 | 0.06 | 2.58 | 0.76 | MapAlign | -VVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQKLRTPLNYILLNLAVADLFMVFGFTTTLYTSGYFVFGCNLEGFFATLGGEIALWSLV--VLAIERYVVVCAIMGVAFTWMALACAAPPLVGWSRYIPEGMQCSCGIDEETNNESFVIYMFVVFIIPLIVIFCYGQLVFTVKEAA-AQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQ | |||||||||||||
10 | 6an7D | 0.14 | 0.13 | 4.43 | 0.54 | MUSTER | --LSLIL-----ELVRQEIKNRYADTVLGIWWAFLWPILLVLIYTLIFSHLIGTVYAYSIYLSSGIFPWFFFSNSLSRITGIFLEVFPVVVIISELINYLIGI-FEGIKYLFPVALYLMIVYSFSIGMVLGTLNVFF-IKEIIGV-------LQIFFWFTPIVYTLDILPPFVKKLIYY-MYPVVSIHHLVFVNY--LDLHLYSLLGFLLASPLVFFVSYYFFKKLEKDIKDF---- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |