Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHCCHHHHHHHHHHCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCCCCCCCSSSSCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MSLRQRLAQLVGRLQDPQKVARFQRLCGVEAPPRRSADRREDEKAEAPLAGDPRLRGRQPGAPGGPQPPGSDRNQCPAKPDGGGAPNGVRNGLAAELGPASPRRAGALRRNSLTGEEGQLARVSNWPLYCLFCFGTELGNELFYILFFPFWIWNLDPLVGRRLVVIWVLVMYLGQCTKDIIRWPRPASPPVVKLEVFYNSEYSMPSTHAMSGTAIPISMVLLTYGRWQYPLIYGLILIPCWCSLVCLSRIYMGMHSILDIIAGFLYTILILAVFYPFVDLIDNFNQTH |
1 | 1iduA | 0.12 | 0.11 | 3.91 | 1.29 | MapAlign | | --EEYNTNYILFWNHVGLELNRVTHTVGGPL---------------------TGPPLSARALGMLHLAIHDAYFSICPPTDFTTFLSPDTENAAYRLPSPNGANDARQAVAGAALKMLSSLYISAYWQTAQGLYWAYDTPPRFYNQIVRRIAVTYFARLFALVDVACTDAGIFSWKEKWEFEFWRPAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGTWD-NIFDSAWELMFENAISRIFLGVHWRFDAAGGVPLGIEIADEIFNGLKPTPPEIQ-- |
2 | 5jkiA | 0.18 | 0.10 | 3.39 | 0.83 | DEthreader | | --------------A-EAISKAAVL-IR------------------------------------------------------------------------------------------------QPWLNEVMTGITHLGASSFLLPLIVIIGAGMFTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFA--PLVH-ES--SFSFPSGHSMNAACVYPVIAYFLVKHPSKHKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKI-KR-F-- |
3 | 1qhbA | 0.10 | 0.10 | 3.69 | 1.07 | EigenThreader | | QSRAKASFDTRVAAAELALARAELYLMALGRDIEFSEFDSPKNAAFIRSAIERLNGLRGEVTVGNLFRGILPGSEVGPYLSQFIIVGSKQIGSLVSPNAADEFDGEIAYGFMTDLKVFLDVQDAADFIRDLATWVHFDSLYEAYLNACLILLANGVPHVLSLVTEVATRALKAVRYQKFNIHRRLRSFLLPMAFAEGSPFHPSYGSGHAVVAGACVTILKAFFSSFPGPLT--VAGELNKLADNVAIGRNMAGVHYFSDQFESLLLGEQIAIGILEEQSLTY-----G |
4 | 5jkiA | 0.21 | 0.14 | 4.32 | 2.23 | SPARKS-K | | ------------------------------------------------------------------------------------------MYKPVSLFLFFLILAAAIHTNAVQSDEAISKAAVQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFFYRGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPLV-----HESSFSFPSGHSMNAACVYPVIAYFLVKHLPFLKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR--- |
5 | 5aa6A | 0.10 | 0.10 | 3.69 | 1.29 | MapAlign | | EAYQLLLDCIESNLLSERLAAQQAEVRDIPFSQFGTNNTVQMAVVNLQGFDAFNGLSISRDADGNIDPMQDLFRTDWPGVSSGPMVSQFMLANFDIDGIVVEPKAKTLYMTGVDTWLNIQNRNG----RDLAALSFNDVLYTEAFRTILIMLEGFTTLGTSHYIHAMAGSTRHAWYAKWVHRVLRPEFLLPMAVGEGSPVHPAYPSGHAINLGAYLTVLKAFCINEDGEEELTYEGELNKVTSNVAIGRSHLGVHWRMDGVFGAEMGEAGAIRRLQQELGGLPEA--- |
6 | 5jkiA | 0.18 | 0.12 | 3.95 | 1.02 | CEthreader | | --------------------------------------------------------------------------------------MYKPVSLFLFFLILAAAIHTNAVQSADEAISKAAVLIRQPWLNEVMTGITHLGASSFLLPLIVIIGAGMFTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPLVH-----ESSFSFPSGHSMNAACVYPVIAYFLVKHLSKHKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR--- |
7 | 3w35A | 0.08 | 0.08 | 3.12 | 1.02 | EigenThreader | | TNRNLNIAALHAQHGVWKRVLLRELMTALGLDPSDETENLSSAFNALKNDGMNFLGYEGRKYNPRPWADYTGYEPVNTAFKVNNPSRWQPQKAHIFRDPSRFRIPRPEFSDHTNTRAYKRSVDEIIDASANALAEIMENKLWGIGHSSIVIANKYDQHWMLAHVLATFEPLIAAWHHKTRFDAVRPVTAIRHVYGLPVGDHPEYPSGSTSLCSATSQAARRYFDSDTPGK-------DTDFTRTCATSRVWGGVHFQTTVDRTIDFGEQFGDLAHEFVQRHVKG---- |
8 | 5jkiA | 0.17 | 0.11 | 3.64 | 1.11 | MUSTER | | ----------------------------------------------------------------------------------------MYKPVSL-AAAIHTNAVQSA-----EAISKAAVLIRQPWLNEVMTGITHLGALPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPLV-----HESSFSFPSGHSMNAACVYPVIAYFLVKHPFLHKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIK----RF |
9 | 1qi9A | 0.13 | 0.12 | 4.35 | 1.26 | MapAlign | | GQVDADAFAALEDCLAAQLAEVYWMARDVPFMQYGTDDITVTAAANLAGMEGFPNLDAVSIGSDGTVDPLSQLFRATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPELLDDELRFVRNAR-----DLARVTFTDINTEAYRGALILLGFGISHYFRLIGAAE-LAQRSSWYQKWVHRFARPEYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALPDDDGLKLILTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMTFAEESTF |
10 | 5jkiA | 0.19 | 0.12 | 4.05 | 3.35 | HHsearch | | -----------------------------------------------------MY---KPVSLFL----FFL--------------I---LAAA-----IHTNAV----QSADEAISKAAVLIRQPWLNEVMTGITHLGASSFLLPLIVAGFFYRKTWDGLLMLLVFGTDRLLNKVLKEWIERVRPDFAPLV-----HESSFSFPSGHSMNAACVYPVIAYFLVKHLPKHKKMVYIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRFR--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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