Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCHHHHHHHHHHHCCSSSCCCCCCCCCSSSSSSCCCCCHHHHHHCCCCCSSSSCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCSSSCHHHHHHHHHHHHHHHHCCCCCCCSSSSSCCCCCCCCSSSSSCCHHHCCCCCCSSSSSCCCCCCCCCCSSSCSSSSSSSSSCCCCSSSSSCCCSSSSCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSCSSSSCCCCCSSSSSSSCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCC MRGRDLCSSTQSQALGSLRTTTPAFTLNIPSEANHTEQPPAGLGARLQEAGVSIPPRRGRPTPTLEKKKKPHLMAEDEPSGALLKPLVFRVDETTPAVVQSVLLERGWNKFDKQEQNAEDWNLYWRTSSFRMTEHNSVKPWQQLNHHPGTTKLTRKDCLAKHLKHMRRMYGTSLYQFIPLTFVMPNDYTKFVAEYFQERQMLGTKHSYWICKPAELSRGRGILIFSDFKDFIFDDMYIVQKYISNPLLIGRYKCDLRIYVCVTGFKPLTIYVYQEGLVRFATEKFDLSNLQNNYAHLTNSSINKSGASYEKIKEVIGHGCKWTLSRFFSYLRSWDVDDLLLWKKIHRMVILTILAIAPSVPFAANCFELFGFDILIDDNLKPWLLEVNYSPALTLDCSTDVLVKRKLVHDIIDLIYLNGLRNEGREASNATHGNSNIDAAKSDRGGLDAPDCLPYDSLSFTSRMYNEDDSVVEKAVSVRPEAAPASQLEGEMSGQDFHLSTREMPQSKPKLRSRHTPHKTLMPYASLFQSHSCKTKTSPCVLSDRGKAPDPQAGNFVLVFPFNEATLGASRNGLNVKRIIQELQKLMNKQHS |
1 | 6vzqA | 0.35 | 0.20 | 5.84 | 0.83 | DEthreader | | -------------------------------------------------------------------------K----------KRLVINLSNCRYDSVRRAAQQYGLREAG-DND-D--WTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKL-FPKDFHFFPRTWCLPADWGDLQTYSRTRK----N--KTYICKPDSGARGRGIFITRSVKEIKPGEDMICQLYISKPFIIDGFKFDLRVYVLVTSCDPLRVFVYNEGLARFATTSYSPNNLDEICMHLTNYSINKHSSNFVQ-DAFS--GSKRKLSTFNSYMKTHGYDVEQIWRGIEDVIIKTLISAHPVINYFSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNC-----KNCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
2 | 6vzqA | 0.31 | 0.20 | 6.17 | 3.64 | SPARKS-K | | -----------------------------------------------------------------------------------KKRLVINLSNCRYDSVRRAAQQYGLREAGDN----DDWTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKLFPK-DFHFFPRTWCLPADWGDLQTYSRTR------KNKTYICKPDSGARGRGIFITRSVKEIKPGEDMICQLYISKPFIIDGFKFDLRVYVLVTSCDPLRVFVYNEGLARFATTSYSHDNLDEICMHLTNYSINKHSSNFVQ---DAFSGSKRKLSTFNSYMKTHGYDVEQIWRGIEDVIIKTLISAHPVITLNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDK-----KKVLEEERQRGRFLQQC-----------IRLEEVKGFQAMRLQKTEEYEKKNCGGFRLIYPGLNLEKYDKFF--------------------------------------------------------------------------------------------- |
3 | 6vzqA | 0.33 | 0.20 | 6.03 | 1.18 | MapAlign | | -------------------------------------------------------------------------------------RLVINLSNCRYDSVRRAAQQYGLREAGDNDD----WTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKL-FPKDFHFFPRTWCLPADWGDLQTYSRT------RKNKTYICKPDSGARGRGIFITRSVKEIKPGEDMICQLYISKPFIIDGFKFDLRVYVLVTSCDPLRVFVYNEGLARFATTSYSPDNLDEICMHLTNYSINKHSSNF---VQDAFSGSKRKLSTFNSYMKTHGYDVEQIWRGIEDVIIKTLISAHPVIYHNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDK-------------------------------------------------------------------------------------------------------------------------------------KKVLEEERQRGRFLQQCEEVKGFQAMRLQKTEEYE-- |
4 | 6vzqA | 0.31 | 0.20 | 6.17 | 0.85 | CEthreader | | -----------------------------------------------------------------------------------KKRLVINLSNCRYDSVRRAAQQYGLREAGD----NDDWTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKLFPKD-FHFFPRTWCLPADWGDLQTYSRTR------KNKTYICKPDSGARGRGIFITRSVKEIKPGEDMICQLYISKPFIIDGFKFDLRVYVLVTSCDPLRVFVYNEGLARFATTSYSLDNLDEICMHLTNYSINKHSSNFV---QDAFSGSKRKLSTFNSYMKTHGYDVEQIWRGIEDVIIKTLISAHPVIKLNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDKKKVLEEERQRGRFLQQCIRLEEVKGFQAMRLQKTEEYEKKNCGGFRLIYPGLNLEKYDKFF------------------------------------------------------------------------------------------------------------- |
5 | 4ylrA | 0.32 | 0.17 | 5.08 | 1.80 | MUSTER | | -------------------------------------------------------------------------------------TITANVAGTKFEIVRLVIDEMGFMKTPDED---ETSNLIWCDSAVQQEKISELQNYQRINHFPGMGEICRKDFLARNMTKMIKSRP-LDYTFVPRTWIFPAEYTQFQNYVKELKKK--RKQKTFIVKP--------ISLIRN-----SQDHLIVQEYIEKPFLMEGYKFDLRIYILVTSCDPLKIFLYHDGLVRMGTEKYIP-------------------------------GSKRSIKWFTEFLQANQHDVAKFWSDISELVVKTLIVAEPHVGSESVCFEVLGFDILLDRKLKPWLLQINRAPSFGTDQKIDYDVKRGVLLNALKLLNIRTMEDKALLEKYENLLAVAFQTFLSGR---------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6vzqA | 0.33 | 0.21 | 6.44 | 3.75 | HHsearch | | -----------------------------------------------------------------------------------KKRLVINLSNCRYDSVRRAAQQYGLREAGD----NDDWTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKLFPK-DFHFFPRTWCLPADWGDLQTYSRT------RKNKTYICKPDSGARGRGIFITRSVKEIKPGEDMICQLYISKPFIIDGFKFDLRVYVLVTSCDPLRVFVYNEGLARFATTSYSLDNLDEICMHLTNYSINKHSSNFVQDA---FSGSKRKLSTFNSYMKTHGYDVEQIWRGIEDVIIKTLISAHPVIKLNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDKKKVLEEERQRGR--F--LQ------------------------------------QC------I-RLEEVKGFQA----------------MR-----------LQKTE---------------EYEKKNCGGFRLIYPGLNL-EKYDKF-F------------------ |
7 | 6vzqA | 0.34 | 0.22 | 6.57 | 3.17 | FFAS-3D | | -----------------------------------------------------------------------------------KKRLVINLSNCRYDSVRRAAQQYGLREA----GDNDDWTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKLFPKD-FHFFPRTWCLPADWGDLQTYSRT------RKNKTYICKPDSGARGRGIFITRSVKEIKPGEDMICQLYISKPFIIDGFKFDLRVYVLVTSCDPLRVFVYNEGLARFATTSYSHPNLDEICMHLTNYSINKHSSNFVQD---AFSGSKRKLSTFNSYMKTHGYDVEQIWRGIEDVIIKTLISAHPVITLNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDKKK----------------------------------------------VLEEERQRGRFLQQCIRLEEVKGFQAMRLQKTEEYEKK-------------------------------------------NCGGFRLIYPGLNLEK------------------------- |
8 | 6vzqA | 0.31 | 0.19 | 5.66 | 1.37 | EigenThreader | | ----------------------------------------------------------------------------------KKRLVINLSNCRYDSVRRAAQQYG-LREA----GDNDDWTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKLF-PKDFHFFPRTWCADWGDLQTYSRTR-------KNKTYICKPDSG-ARGRGIFITRSVKEIKPGEDMICQLYISKPFIIDGFKFDLRVYVLVTSCPLR-VFVYNEGLARFATTSYSHPNLDEICMHLTNYSINKHSSNFVQD---AFSGSKRKLSTFNSYMKTHGYDVEQIWRGIEDVIIKTLISAHPVIKHNSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDKKKVLEEERQRGRFLQQCIKNCGGGLNLEKYDKFF---------------------------------------------------------------------------------------------------------------------------------------- |
9 | 6vzsA | 0.36 | 0.20 | 5.89 | 3.87 | CNFpred | | --------------------------------------------------------------------------------------LVINLSNCRYDSVRRAAQQYGLREAGD----NDDWTLYWTDYSVSLERVMEMKSYQKINHFPGMSEICRKDLLARNMSRMLKLFP-KDFHFFPRTWCLPADWGDLQTYSRT------RKNKTYICKPDSGARGRGIFITRSVKEIKPGEDMICQLYISKPFIIDGFKFDLRVYVLVTSCDPLRVFVYNEGLARFATTSYSHPNLDEICMHLTNYSINKHSSNFVQDAF---SGSKRKLSTFNSYMKTHGYDVEQIWRGIEDVIIKTLISAHPVIK-NSACFEILGFDILLDRKLKPWLLEVNISPSFSTDSKLDKEVKDSLLYDALVLINLGNCDKKKVL---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6y4mF | 0.28 | 0.15 | 4.60 | 0.83 | DEthreader | | ------------------------------------------------------------------------------------MYTFVVRDENSSAEVSRLLLATGQWKRLRK-DNPR-FNLMLGERRLPFGRLGHEPLVQLVNYYRGADKLCRKASLVKLIKTS-PELSES-CTWFPESYVIYDEREVFLAAYNRRREG-RE-GNVWIAKSS-----EGILISSEASELLIDQVHVIQKYLEKPLLLEHRKFDIRSWVLVDHL--YNIYLYREGVLRTSSEPYNSANFQDKTCHLTNHCIQKEYSKNYGR--YEEG-NEMFFEEFNQYLMDANTTLENILLQIKHIIRSCLMCIEPAISTLYQSFQLFGFDFMVDEELKVWLIEVNGAPAC------AQKLYAELCQGIVDVAISSFPLAD---TSIF------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|