Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
| | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCSSSCCCCCCCCCSSSSSSCCCCSSSSSSSCCCCCCCCCCCCCCSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCC MEELDGEPTVTLIPGVNSKKNQMYFDWGPGEMLVCETSFNKKEKSEMVPSCPFIYIIRKDVDVYSQILRKLFNESHGIFLGLQRIDEELTGKSRKSQLVRVSKNYRSVIRACMEEMHQVAIAAKDPANGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNLVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTMPILSPGNTQTLTELELKWQHWHEECERYLQDSTFATSPHLESLLKIMLGDEAALLEQKELLSNWYHFLVTRLLYSNPTVKPIDLHYYAQSSLDLFLGGESSPEPLDNILLAAFEFDIHQVIKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLGVDYFDYCPELGRVSLELHIERIP |
1 | 3f3fD | 0.14 | 0.12 | 4.09 | 1.17 | DEthreader | | SG----KMPLKFK-----------LG--SYQNM-----------------------VRIPRLDTSKEFSAYVSGLFEIYRDLGDDRVFNNFKEHNATVNLAMEAILNELEVFIGRVKDQDG----------RVNRFYELEESLTVLNCLRTMFILDQENRSFIESLLNWINRSDGEPDEEYIEQVFSVKVFETQYFWKLLNQLVLRGLLSQAIGCIERDLLPYDTCAVSFDAVSDSIELLQYPKD---S-SSTFREWKNLVLKLSQAFGSSATIGELDYIEDFLLVIGGNQRKILQYS--R-TWYESFCGFLLYYIP-SL-ELSAEYLQMSLEANVV--DITNDWEQPCVDIISGKIHSILPVMES-L-DSCTAAFTAMICEAKGLIENIFEGYRNGMASYMLNSFAFELCSLGDLWPVAIGLIALSGTAKKMVIAELLPHYP |
2 | 3f3fD | 0.16 | 0.14 | 4.75 | 1.94 | SPARKS-K | | VPMTVNDQ----PIEKNGDKMPLKFKLGPLSNMAFIT----------AKDKYKLYPVRIPRLDTSKEFSAYVSGLFEIYRDLGDDRVFNVNSN---FAKEHNATVNLAMEAILNELEVFIGRVKDQDGRVN---RFYELEESLTVLNCLRTMYFILDGQDEFIESLLNWINRSDGEPEEYIEQVFSVKKVFETQYFWKLLNQLVLRGLLSQAIGCIPYLSDTCAVSFDAVSDSIELLKQYPKDS----------SSTFREWKNLVLKLSQAFDISLRDYIEDFLLVIGGNQRKILQY---SRTWYESFCGFLLYYIPS--LELSAEYLQMSLEANVVDITND--WEQPCVDIISGKIHSILPVMESLD--SCTAAFTAMICEAKGLIENIFEGYRNGMASYMLNSFAFELCSDKELWPVAIGLIALSASAKKMVIAELLPHYP |
3 | 3f3fD | 0.14 | 0.13 | 4.44 | 2.29 | MapAlign | | --ILVPMTVNDQPIEKNGDKMPLKFKGLSYQNMAFITA----------KDKYKLYPVRIPRLDTSKEFSAYVSGLFEIYRDLGDDRVFNVAKEHNATVNLAMEAILNELEVFIGRVKDQD----------GRVNRFYELEESLTVLNCLRTMYFIEENRSEFIESLLNWINRSDGEPEEYIEQVFSAGKVFETQYFWKLLNQLVLRGLLSQAIGCIERSLSTCAVSFDAVSDSIELLKQYPKD----------SSSTFREWKNLVLKLSQ--AFGLRDYIEDFLLVIGGNQRKILQY---SRTWYESFCGFLLYYIP--SLELSAEYLQMSLEANVV--DITNDWEQPCVDIISGKIHSILPVMESLD--SCTAAFTAMICEAKGLIENIFFSYRNGMASYMLNSFAFELCGDKELWPVAIGLIALSTGAKKMVIAELLPHYP |
4 | 3f3fD | 0.15 | 0.14 | 4.72 | 1.75 | CEthreader | | GAILVPMTVNDQPIEKNGDKMPLKFKLGPLSYQNMAF--------ITAKDKYKLYPVRIPRLDTSKEFSAYVSGLFEIYRDLGDDRVFNVNSNFAKEHNATVNLAMEAILNELEVFIGRVKDQDG------RVNRFYELEESLTVLNCLRTMYFILDGQSEFIESLLNWINRSDGEPDEEYIEQVFSKKVFETQYFWKLLNQLVLRGLLSQAIGCIPYLSDTCAVSFDAVSDSIELLKQYPKDSSST---FREWKNLVLKLSQAFGSSATDISGELRDYIEDFLLVIGGNQRKILQYSR---TWYESFCGFLLYYIPS--LELSAEYLQMSLEANVVD--ITNDWEQPCVDIISGKIHSILPVMESLD--SCTAAFTAMICEAKGLIENIFFSYRNGMASYMLNSFAFELCSLGDLWPVAIGLIALSASAKKMVIAELLPHYP |
5 | 5a9q8 | 0.99 | 0.90 | 25.16 | 1.84 | MUSTER | | --------TVTLIPGVNSKKNQMYFDWGPGEMLVCETSFNKS--------CPFIYIIRKDVDVYSQILRKLFNESHGIFLGLQRIDEELT------QLVRVSKNYRSVIRACMEEMHQVAIAAKDPANGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNLVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTMPIL----------SELKWQHWHEECERYLQDSTFATSPHLESLLKIMLGDEAALLEQKS---NWYHFLVTRLLYSNPTV--IDLHYYAQSSLDLF--GESSPEPLDNILLAAFEFDIHQVIKECSIAN--WWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLGVDYFDYCPELGRVSLELHIERIP |
6 | 5a9q8 | 0.98 | 0.89 | 24.98 | 6.80 | HHsearch | | --------TVTLIPGVNSKKNQMYFDWGPGEMLVCETSFNK--------SCPFIYIIRKDVDVYSQILRKLFNESHGIFLGLQRIDEEL------TQLVRVSKNYRSVIRACMEEMHQVAIAAKDPANGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNLVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTMPILS----------ELKWQHWHEECERYLQDSTFATSPHLESLLKIMLGDEAALLEQ---KSNWYHFLVTRLLYSNPTV--IDLHYYAQSSLDLFGES--SPEPLDNILLAAFEFDIHQVIKECS-IA-NWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLGVDYFDYCPELGRVSLELHIERIP |
7 | 5a9q8 | 0.96 | 0.87 | 24.49 | 3.13 | FFAS-3D | | --------TVTLIPGVNSKKNQMYFDWGPGEMLVCET--------SFNKSCPFIYIIRKDVDVYSQILRKLFNESHGIFLGLQRIDEELTQ------LVRVSKNYRSVIRACMEEMHQVAIAAKDPANGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNLVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTMPILSE----------LKWQHWHEECERYLQDSTFATSPHLESLLKIMLGDEAALLEQ---KSNWYHFLVTRLLYSNPTVI--DLHYYAQSSLDLFGESSPEP--LDNILLAAFEFDIHQVIKECSI--ANWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLGVDYFDYCPELGRVSLELHIERIP |
8 | 3f3fD | 0.15 | 0.13 | 4.44 | 1.93 | EigenThreader | | GAILVPMTVNDQPIEKNGDKMPLKFKL-----GPLSYAKDKYKLVRIPRLDT------------SKEFSAYVSGLFEIYRDLGDDRV---FNVNSEHNATVNLAMEAILNELEVFIGRVKDQDGRV-------NRFYELEESLTVLNCLRTMYFILDGQDEFIESLLNWINRSDGEPDEYIEQVFSGKKVFETQYFWKLLNQLVLRGLLSQAIGCIEYLSDTCAVSFDAVSDSIELLKQYPKDS------SSTFREWKNLVLKLSQAFGS--SATDISYIEDFLLVIGGNQRKILQY---SRTWYESFCGFLLYY--IPSLELSAEYLQMSLEANVVDITNDWE--QPCVDIISGKIHSILPVMESLD--SCTAAFTAMICEAKGLIENIFFSYRNGMASYMLNSFAFELCSLGDLWPVAIGLIALSATKKMVIAELLPHYPF |
9 | 5a9q8 | 1.00 | 0.91 | 25.41 | 1.97 | CNFpred | | --------TVTLIPGVNSKKNQMYFDWGPGEMLVCETSFNK--------SCPFIYIIRKDVDVYSQILRKLFNESHGIFLGLQRIDEELT------QLVRVSKNYRSVIRACMEEMHQVAIAAKDPANGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNLVTILVLQGRLDEARQMLSKEADASPASAGICRIMGDLMRTMPILS----------ELKWQHWHEECERYLQDSTFATSPHLESLLKIMLGDEAALLEQK---SNWYHFLVTRLLYSNPTV--IDLHYYAQSSLDLF--GESSPEPLDNILLAAFEFDIHQVIKECSIA--NWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLGVDYFDYCPELGRVSLELHIERIP |
10 | 5a9q8 | 0.76 | 0.64 | 18.02 | 1.17 | DEthreader | | TV------QMYFD-----------WG--EMLVC-----------------------IRKDVDVYSQILRKLFNESHGIFLGLQRIDEELTVSNYRSVIRACMEEMHQVAIAAKDPANGRQ-----------FSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSLSADVLGSENPSKHDSFWNLVTILVLQGRLDEARQMLSKEADASP-ASA--GICRIMGDLMTMPIL---S-ELKWQHWHEECERYLQDS-TFATSP-H--LESLLKIMLGDEAALLEQK--S-NWYHFLVTRLLYSNP-T-VIDLHYYAQSSLDLFGE--SSPEPLDNILLAAFEFDIHQVIKECSI-A-NWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHPSLWQLGVDYFDYCPELGRVSLELHIERIP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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