Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660
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| SS Seq | CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHCHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCSSSSSSSCCCCCHHHCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCSSSCCCCCHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCSSCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCSSSSSSSSSSSSCCSSSSCCCCCCCCCCCCCCSSSSCCCCCCCSSSCCCSSSSCCCHHHHHHHHHHHHHHCCHHHCCCHHHCCCCCSSSSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCSSSSSSSCCCCCCHHHHHHHHHHHHHHHCCCCCCCSSCCC MDPQRSPLLEVKGNIELKRPLIKAPSQLPLSGSRLKRRPDQMEDGLEPEKKRTRGLGATTKITTSHPRVPSLTTVPQTQGQTTAQKVSKKTGPRCSTAIATGLKNQKPVPAVPVQKSGTSGVPPMAGGKKPSKRPAWDLKGQLCDLNAELKRCRERTQTLDQENQQLQDQLRDAQQQVKALGTERTTLEGHLAKVQAQAEQGQQELKNLRACVLELEERLSTQEGLVQELQKKQVELQEERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQETVAQAALLTEREERLHGLEMERRRLHNQLQELKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPTRHDFSFDRVFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIGTAQANRK |
1 | 1cz7D | 0.43 | 0.23 | 6.75 | 0.83 | DEthreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---V-HLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLENRMCC--TWTYHD---------ESTVELQSIDAQA-----KSKMGQQIFS-FDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVP--E--SVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQK-----DMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGS-E-----------------SPIN-RSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCK--------- |
2 | 4ozqA | 0.23 | 0.21 | 6.45 | 1.39 | MapAlign | | ---GLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAAGGYNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSSPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAENSQVTVAVRVRPFSKREKTEKASQVVFT--------NGEEITVEH-----------PDMKQVYSFIYDVSFPGYASQTTVYETLAPLLDRAFEGYNTCLFAYGQTGSGKSYTMMGL----NEEPGIIPRFCEDLFAQIAKKQTSEVSYHLEMSFFEVYNEKIHDLLVK-------QPLRAREH--PVSGPYVEGLSMNVVSSYSDIQSWLELGNKQRAT------AKSSRSHSVFTLVMTQTKTEHDHRITSRINLVDLAGSERC-------STAGQRLKEGVSINKSLLTLGKVISALSGKRVFIPYRESTLTWLLKESLGGNSKTAMIATVSPAASNIEETLSTLRYATQAR------------ |
3 | 1cz7D | 0.44 | 0.24 | 7.00 | 2.72 | SPARKS-K | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDE--------STVELQSIDAQAKS------KMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV----PESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKD-----MEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESP-------------------INRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCK--------- |
4 | 4ozqA | 0.21 | 0.17 | 5.41 | 1.70 | EigenThreader | | NGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVDLLPNPPKTGKFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDN--------------------------------------------------------------------------AGAKAGLTFLVDLIKNSIAEAAFNKGWAWSNIDTSKELAKEFLENYEGLEAVNKDKSYEEELARIAATMENAQKGMSAFWYAVRTAVINAASGDAALAAAQTNAAAENSQVTVAVRVRPFSEKTEKASQVVFTNG----------EEITVEH-----------PDMKQVYSFIYDVFWSFYASQTTVYETLAPLLDRAFEGYNTCLFAYGQTGSGKSYTMM------GLNEEIIPRFCEDLFAQIAKKQTSEVSYHLEMSFFEVYNEKIHDL-----LVKQPLRAREHP-----VSGPYVSMNVVS--SYSDIQSWLELGNKQRATAK------SSRSHSVFTLVMTQTKTEHDHRITSRINLVDLAGSERC---STAGQRLKEGVSINKSLLTLGKVISALSEQANGKRVFIPYRESTLTWLLKESLGGNSKTAMIATVSPAASNIEETLSTLRYATQAR------------ |
5 | 3hqdA | 0.33 | 0.17 | 5.04 | 0.57 | CEthreader | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNIQVVVRCRPFNLAERKASAHSIVECDPVR-----KEVSVRTGG---------LADKSSRKTYTFDMVFGASTQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERWEEDPLAGIIPRTLHQIFEKLTDNG---TEFSVKVSLLEIYNEELFDLLNPSSDVSE--RLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTEELVKIGKLNLVDLAGSENIGRSGAV----DKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVN--- |
6 | 4h1gA | 0.27 | 0.24 | 7.39 | 1.37 | MapAlign | | ---GLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAAGGYAFKIKDVGVDAGAKAGLTFLVDLIKNADTYSIAEAAFNKGETAMTINGPWAWSNIDTFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDAVAKSYEEELAKPRIAATMENAQKPNIPQMSAFWYAVRTAVINAARQTVDAALAAAQTNAKGNIRVFCRIRNV-------DIIQYEAP---------QQELVITRNI---------NNNFSNLRFLFDKIFEREQSNDLVFEELSQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHP------TNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLN--PKIDPNTKYEIKHD-DIAGKTTVTNVSTIDIKSPEQAITILNQANKKH----------SSRSHSIFIIDLQGYNSLTKESSYGTLNLIDLAGSE-------------RRLKETQAINKSLSCLGDVIHSLNLDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNN----------- |
7 | 1cz7D | 0.44 | 0.24 | 7.04 | 1.98 | MUSTER | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDES--------TVELQSIDAQ------AKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV----PESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKD-----MEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSES-------------------PINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCK--------- |
8 | 4h1gA | 0.34 | 0.26 | 7.91 | 2.49 | HHsearch | | LLP-NPPILKAKGKSALMFNLQEPYFTWPLI---AADGGYAFKGVDNAG--AKAGLTFLVDLIKNMNADTDYSIAEAAFNKG--ETAMTINGPWAWSNIDTS-KVNYGVTVLPTFKSKPFVGSAGINAASPNKELAKEFLEYLLTDEGLE-AVNKD-------KPLGA--------------VALKSYEEELAK----DPR-------IAA--------------TMENAQ-------KGE--IMPNI----PQMSAFWYAVR---TAVINAASG-------------R-QTVDAALAAAQTNAAALKGNIRVFCRIRNVDIIQYEAPQQ----------------ELVITRN---------INNNFSNLRFLFDKIFEREQSNDLVFEELSQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPT------NGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKIDP--NTKYEIKHDDI-AGKTTVTNVSTIDIKSPEQAITILNQAN----------KKHSSRSHSIFIIDLQGYNSLTKESSYGTLNLIDLAGSER-------------RLKETQAINKSLSCLGDVIHSLNLKGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNN----------- |
9 | 1cz7D | 0.45 | 0.25 | 7.16 | 2.49 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSTEVVHL----------------------------RQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDE--------STVELQSIDAQ------AKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPE----SVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQ-----KDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESP-------------------INRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCK--------- |
10 | 4h1gA | 0.26 | 0.20 | 6.11 | 1.63 | EigenThreader | | -----------------KIEEGNGDKGYNGLAEVGKKFEKDTGIPDKLEEKFPQVAATGDGPDFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIANKDLLPNPPKTWEEIPALDKELKAKGKFNLQE---------------------------------------------------------------PYFTWPLIAADGAKAGLTFLVDLIKNSIAEAAFNKWAWSNIDTSELAKEFLENYEGLEAVNKDKSYEEELARIAATMENAQKGSAFWYAVRTAVINAASDAALAAAQTNAAGNIRVFCRIRNV------DIIQYEA----------PQQELVITRN---------------NLRFLFDKIFEREQSNDLVFEELSQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPTN-----GMIPLSLKKIFNDIEELKEKGWS-YTVRGKFIEIYNEAIVDLLNPKIDPNTKYEIKHDD----IAGKTVTNVSTIDIKSPEQAITILNQANKKHSS----------RSHSIFIIDLQGYNSLTKESSYGTLNLIDLAGSERR------------LKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVN-N---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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