Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140
| | | | | | | |
| SS Seq | CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCSSSCCCCHHHHCCCCCCCHHHHHCCCCCCCCCCSSSSHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC MLLRLVSNSWPQVILPPRPPKVLGLQAPRRARKRAEGTASSNVFSMFDQSQIQEFKESLALSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFIDKEDLRDTFAALGRINVKNEELEAMVKEAPGPINFTVFLTMFGEKLKGT |
1 | 6u2mA2 | 0.23 | 0.22 | 6.76 | 1.19 | SPARKS-K | | PRLDTLILVKAMGHRKRFGN----PFRPRDQLTEEQIAEFKEAFSLFDKDELGTVMRSLGQNPTEDGNGTIDFPEFLTMMARTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADGQVNYEEFVQMMTA----- |
2 | 1a29A | 0.19 | 0.17 | 5.48 | 1.15 | MUSTER | | ----QLTEEQIAEF------KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMADTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADGQVNYEEFVQMMT------ |
3 | 3evuA | 0.22 | 0.21 | 6.61 | 1.01 | HHsearch | | FFKSAMPEGYIQERTIFFNYKTVKFKGIDFKLTEEQIAEFKEAFSLFDKDELGTVMRSLGQNPTADGNGTIDFPEFLTMMARMKSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADGQVNYEEFVQMMTA----- |
4 | 4ociA | 0.14 | 0.12 | 4.01 | 1.09 | FFAS-3D | | -----------------------LKESFLLFDGDGDGYLTLNEFESLVRVLTSAIASTYNSNSKVRGSYELFTSCFSQLKTKSFNKDEIKTAINVLDKDKKGFIPAIELRRILSTIGD-NEQKEITDLFTFDEQGVVKVDDFINQDNHHHH-- |
5 | 6u2mA | 0.16 | 0.12 | 4.12 | 1.00 | DEthreader | | -------------------------AGEPAVPIPTWDEWPFARDQLT--EEQIAEFKE-AFSFVDID-FPFLTMMARK-MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREDGDQVNYEEFVQMMTA----- |
6 | 3u0kA2 | 0.22 | 0.19 | 5.98 | 1.19 | SPARKS-K | | RKWNKTGHAVRAIGR------------LSSALTEEQIAEFKEAFSLFDKDELGTVMRSLGQNPTEDGDGTIDFPEFLIMMARKE--EEIREAFRVFDKDGNGYISAAELRHVMTNLGE-KLTDEEVDEMIREADGQVNYEEFVQMMT------ |
7 | 2f33A | 0.11 | 0.10 | 3.78 | 0.68 | MapAlign | | ---SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAIETEELKNFLKDMLKLFDSNNDGKLELTEMARLQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLDINNI-STYKKNIMALSDGKLYRTDLALILSAGDN-- |
8 | 2f33A | 0.11 | 0.11 | 3.99 | 0.43 | CEthreader | | FRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQSTYKKNIMALSGGKLYRTDLALILSAGDN-- |
9 | 4gowD | 0.19 | 0.16 | 5.29 | 1.13 | MUSTER | | QLTEEQIAEFKEA-----------SLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKEEEIREAFRVFDKDGNGYISAAELRHVMTNLG-EKLTDEEVDEMIREADGQVNYEEFVQMMT------ |
10 | 4i2yA | 0.22 | 0.21 | 6.59 | 0.99 | HHsearch | | QDGVFIYKVKLRGTNFPPDGPVMGWEATRDQLTEEQIAEFKEAFSLFDKDELGTVMRSLGQNPTADGDGTFDFPEFLTMMARKDSEEEIREAFRVFDKDGNGYIGAAELRHVMTDLGE-KLTDEEVDEMIRVADGQVNYEEFVQMM------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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