Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCCCCHHHHHHHCCCCHHHHCCCCCCCSSSCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCSSCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCSCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCSSCCCCCHHHHHCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCCCCCSSCCCCCHHHHHCCCCCCCCCCCCCCCCCCCSSCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCSCCCCCCCCCCCCCCCCCC MASSPAVDVSCRRREKRRQLDARRSKCRIRLGGHMEQWCLLKERLGFSLHSQLAKFLLDRYTSSGCVLCAGPEPLPPKGLQYLVLLSHAHSRECSLVPGLRGPGGQDGGLVWECSAGHTFSWGPSLSPTPSEAPKPASLPHTTRRSWCSEATSGQELADLESEHDERTQEARLPRRVGPPPETFPPPGEEEGEEEEDNDEDEEEMLSDASLWTYSSSPDDSEPDAPRLLPSPVTCTPKEGETPPAPAALSSPLAVPALSASSLSSRAPPPAEVRVQPQLSRTPQAAQQTEALASTGSQAQSAPTPAWDEDTAQIGPKRIRKAAKRELMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFCARSFRTSSNLVIHRRIHTGEKPLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESPSGPLEPCPSISAPGPLGSSEGSRPSASPQAPTLLPQQ |
1 | 5v3jE | 0.19 | 0.10 | 3.29 | 0.62 | CEthreader | | ------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSH--LLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKG--------------------------------------------------------------------------------------------------------------------------FISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQR-AHSGDKPYKCKE--CGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------- |
2 | 6tedQ | 0.04 | 0.04 | 1.98 | 0.92 | EigenThreader | | GDKMDQADAQFHFVLNQSKACISFNKKD----YRGALAYYKKALRTNVRLGMGHCFARLAFSRALELNSKCVGALPSNPMVLNHLANHFFFKKDQHLALHAFHNTEVEAMQAESCYQLARSFHVQEDYYQATQFASSSFVLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQIELAQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYEAM-------------CEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGNFYEASDWFKEALQINQDH---PDAWSLIGNLHLAKQEWGPGQKKFERILKQPST-----QKQYISACLRKFYKHQ--NTEVVLYLALQECKQTLLKARHVAPS-----DTVLMFNVALVLQRLATSVLKDEKSNLKEVLNAVKELELAHRYFSYLSKVGDKMRFDLALA |
3 | 5t0uA | 0.27 | 0.08 | 2.37 | 1.40 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHLNTHTGTRPHKCP--DCDMAFVTSGELVRHRRYKHTHEKPFKCSM--CDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKH-TENVAKFHCPHCDTVIARKSDLGVHLRKQH------------------------------------------------ |
4 | 6bcuA | 0.04 | 0.02 | 1.23 | 0.67 | DEthreader | | RKLIQILLALALILKLKDDIIDMLQDSS----------YPTLLEVLLNFLKT----EMLVNMGNLP----DEFYPAVSMVALMRIFRDQSLSHHHTMVVITFIFKGLKCFLMFLIRREFLQL-M---------VAGA-QLFGALD-----------------------KAALETVDRLFYASRI------------HPIVRTLDSPELRSTA------------------------------------------------------------------------------------V-ERRIIRIWWDMRTWLKTLVLLGVDPSRQLDHP--------MNMWSARKIDAFQHM---------------------FLKLGEWQLNGITIPKVLQYYSAAT-HD--WYKAWHAWAVMNFEA----TLLMYTVPAVFLRVLTWFPQRQLFVNSIQRYAVMVGYILGFKDSVMAVLEAFVYDPLLNWRLMKAIQIINRVRD--------H------------- |
5 | 5kkqA | 0.28 | 0.08 | 2.36 | 2.15 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCS--MCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTE-NVAKFHCPHCDTVIARKSDLGVHLRKQHSYI--------------------------------------------- |
6 | 6wvjC | 0.06 | 0.06 | 2.48 | 1.58 | MapAlign | | EIQTSSYQWFLDEGLREMFQDIDFTGNLSLEFIDYSLGEPKYPVEESRDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFSPSVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDADVVYVRIDRTRKLPVTVLLRALGFGSDQEILDLIGENEYLRDKALLEIYERLRPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKINKKLNQRLAETLVDPERRTLDKVLPYLKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQVINVIGNAYIEEEIKNITPADIISSISYFFNLLHGVGLRSVGELLQNQFRIGLSRMERVVRERMSIRRVDPETGKVTGRIDAQANARLDDEGAFIDDSIVARFRGENTVVSRNRALMGANMQRVEAKNVWVRRYEEVDGQKVKGNLDKYSLDLLVGKVTPEVRDTSLREDVWETLEEAGMSRARSTGPYSLVTQQPLVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSGDEEEI------------- |
7 | 5v3jE | 0.21 | 0.11 | 3.43 | 1.36 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTKLHVGEKPYKCQECGKAFPSNASLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGAR----RFECKDCDKVYSCASQLALHQM-SHTGEKPHKCKE--CGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVH---TGDRPHKCKECGKAFIRRSELTHHER-------SHSGEKPYECKECGKTFGRGSELSRHQKIHT------------- |
8 | 3h0gB | 0.05 | 0.04 | 2.14 | 1.45 | MapAlign | | ----QEDCWTVISSFFEESKVFIGKIPIMLRSTFCILNGVSDSELYDLNECPYDQGGYFIINGSEKVIVFKKAAPSPIAYVAEIRSALERGSRLISSMQIKLMANSGQTIRATLPYRSDIPIFLGYMIHRMLLCALERREPDDRDHFGKKRLDLAGPLLASLFRMLFRKMTRDVYKYMQKCVETNREFNLTLAVKSNIITNGLRYSLWGMVCPAETPEGQACGLVKNLSLMSYVSVGSPSAPIIEFLEEWGLETLEDYNPSASPNATKVFVNGVWLGVHRDPAHLTETLRSLRRRLDISA-----------------------EVSIVRDIREKELRLEHIQQLIEFGWTALVSSGLIEYLDAEEEETVMIAPEDLEASRQMTRVSGEDIIIGKTAPIQLHAKRDVSTPLVDQVMVTTNQEGLKFVKVREAVSKLLRSHGFQSRGRGPVQILTRQPVEMERDCQISHGCSSVLRERLFDCSDAYRVIVCDICGLIAIASYKKDSYECRSCQNRTR---- |
9 | 6wmiA | 0.39 | 0.11 | 3.13 | 1.39 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKLKCTVEGCDRTFVWPAHFKYHLK-THRNDRSFICPAEGCGKSFYVLQRLKVHMRTHNGEKPFMCHECGKQFTTAGNLKNHRRIHTGEKPFLCEACGRSFAEYSSLRKHLVVHSGE---KPHQCQVCGKTFSQSGSRNVHMRKHH------------------------------------------------ |
10 | 4qiwB | 0.06 | 0.06 | 2.45 | 1.42 | MapAlign | | ------LTPDELWLVMESYWKEKGFVRQHLDSYNAFIYPMDARIRNLTYEELIKLEDPKDPGGYFIINGSERVIVSIEDLAPNKTLVERDERQNKVVAKVFSYRHGYRALITVERKKILYVTIP----NVPKPVKFVYVMRALGLLTDKEIVEAVSDDPRIQQVLFDNLEDASDISTQEEALDYIGRLALPGQPKEYRLRRAEHIIDNNLLPHMGVDPENRRAKAYYLGMMALKVLELSLGLR--------------GEDDKDHYANKRLKLAGDLLKDLFRVAFGQLVKDMQYQMTKTYQRENIQRFVRNSIRPDVLSERIEHALATGSWPGGRTGVSREYLMKMPIEERRPAPGLYRVYLNGVLIGTVEDGRKLVERIRADRRAGKISDVINVALYEDEEVKEVYIEGKDVLVGRTSPPRRRETSVEKLRKELEELGFKHSGREIMYDGITGRRLEMERDVLIGHGAAMLLIERLLEESDKTEVWVCESCGHLALEDKRRGKVYCPVCGEDE----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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