Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCSSSSSSCCHHHHCCCCCCCCSCCCCCCSSSCCSSCCCCCSSSSSCCCCCCCCCCHHHHHHHHHHHHHHHHCSSSSSCCCSSSSSSCCCCSSSSSCCCCCCCCCSSSSSCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC INPLLPACLNKEESKTCKFVSSFMSELSPVRAELLGFLTHALLGDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSNLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNMEEYMNSLLSAVLPSVLNKFRIYLTLLRFL |
1 | 3ja85 | 0.11 | 0.10 | 3.55 | 1.17 | DEthreader | | --------------EEEEEFLQLSRN-PKLYEILTNSIAPSIFGNEDIKKAIVCLLM-GGSKKILMRLRGDINVLLLG-DPGT-AKSQLLKFVEKVSPIAVYTSGK-GSS-AGLTASVQRDTEFYLEGGAMVLADGGVVCIDEF-DK---M---RDEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPNIDILFDMIFIVKDRDSIAHVINIHTNNAMNQEEISIEKMKRYITYCRLA |
2 | 3f8tA | 0.14 | 0.13 | 4.34 | 0.92 | SPARKS-K | | ATLDALEVHKKDPIPEVHPDPAELEEFRELADDPLTTFARAIAGAEEVGKMLALQLFSCV-----GKNSERLHVLLAG--YPVVCSEILHHVLDHLAPRGVYVDTELTDLT----AVLKEDRGWALRAGAAVLADGGILAVDHL----EGAPE---PHRWALMEAMDKGTVTVD----GIALNARCAVLAAINPDPPIDLDFDLIAFLGVPSYTLLRRYLLYAIELTEEARKRLEHWYETRREE |
3 | 3ja82 | 0.12 | 0.11 | 3.80 | 1.16 | MapAlign | | -----FATIIEANSIKRREVFSWEEEEREFIDKIISSMAPSIYGHRDIKTAVACSLFGGPKNVNGKHSIGDINVLLLGD--PGTAKSQILKYVEKTAHRAVFATGQGAS--AVGLTASVRTKEWTLEGGALVLADKGVCLIDEFDK-------MNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPTEPIRFDILCVVRDLVDEEADERLATFVVDPIPQELLMKYIHYARTK--- |
4 | 3ja82 | 0.10 | 0.09 | 3.52 | 0.85 | CEthreader | | EANSIKRREVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKTLEGGALVLADKGVCLIDEFD-------KMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGLSRFDILCVVRDLVDEEALATFVVDSHVRSSPIPQELLMKYIHYARTK |
5 | 3ja872 | 0.16 | 0.15 | 4.91 | 0.76 | MUSTER | | ----------KKKFASFSLTSDVEERVMELITSVYNRLAKSIYGNLDVKKALLLLLVGGVDKRVGDGMKIRGDINVCLMGDPGVAKSQLLKAICKISPRGVYTTGKGSSGVGLTAAVMKDPVTDELEGGALVLADNGICCIDE-------FDKMDESDRTAIHEVMEQQTISISKAGINTTLNARTSILAAALDNINLPFDILFLMLDIPSREKLAEHVTYVHMHFTPVEPSKMREYIAYAKTK |
6 | 6xtx5 | 0.12 | 0.11 | 3.91 | 2.31 | HHsearch | | VGVYIRVLGIQVDTVPQEEEFRRLAALPNVYEVISKSIAPSIFGGTDMKKAIACLLFGGSRKRLPGLTRGDINLLMLGDPGT--AKSQLLKFVEKCSPIGVYTSLTASVMRD------PSSRNFIMEGGAMVLADGGVVCIDEFD----KMREDD---RVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANFPTILRFDMIFIVKDEHNEERLAKHVITLHVSI---DLAKLKKFIAYCRVC |
7 | 3ja872 | 0.17 | 0.16 | 5.24 | 0.89 | FFAS-3D | | ----------KKKFASFSLTSDVEERVMELINRLAKSIAPEIYGNLDVKKALLLLLVGGVDKRDGMKIRGDINVCLMGDPGVAK--SQLLKAICKISPRGVYTTGKGSSGVGLTAAVMKDPVTDELEGGALVLADNGICCIDE----FDKMDE---SDRTAIHEVMEQQTISISKAGINTTLNARTSILAAANPLYLSRFDILFLMLDIPSRDDDEKLAEHVTYVFTPVEPSKMREYIAYAKTK |
8 | 3ja86 | 0.10 | 0.09 | 3.48 | 1.42 | EigenThreader | | TRGISKTRSLGV--RDLTYKISFINELKEMVKDYDKLVRSIVFGHEAVKKGILLQMLGGVHKSTVEGIKGDINICVVGDPSTS--KSQFLKYVVGFAPRSVYTSGKA--SSAAGLTAAVVRDDYTIEAGALMLADNGICCIDEFDKMDI-------SDQVAIHEAMEQQTISIAKAGIHATLNARTSILAAANMTAPIMSRFDLFFVILDDCNEKIDTELASHIVDLHMLRRYIKYAR----TF |
9 | 4r7yA | 0.16 | 0.14 | 4.49 | 1.27 | CNFpred | | -----------------------------IVDAIVDSIAPAIYGYKEVKKGIALALFGGVSRKLGTRLRGDIHVLLVGDP--GVAKSQILRYVANLAPRAIYTSGKSSSAAGLTAAAVRDEGGWVLEAGALVLADGGYALIDELD----KMSDR---DRSVIHEALEQQTISISKAGITATLNARTTVIAAANP-LLSRFDLIFVLIDEPDDKIDSEVARHILREVVAPPHEILRKYIAYARKN |
10 | 3ja862 | 0.10 | 0.09 | 3.32 | 1.17 | DEthreader | | -----------S--DEINELKEMVKDEHI-YDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKSTVIKLRGDINICVVG-DPST-SKSQFLKYVVGFAPRSVYTSGK--AS-SAAGTAAVVRGDYTIEAGALMLADNGICCIDEF-DK-M-D----ISDQVAIHEAMEQQTISIAKAGIHATLNARTSILAAANPLNMIMFDLFFVILDDIDLAHIVDLHKDEAIEPP-FSAEQLRRYIKYARTF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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