Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHSSSSSCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSC MALALAALAAVEPACGSRYQQLQNEEESGEPEQAAGDAPPPYSSISAESAAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGRDEDFVGRDDFDDADQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPETFSNLPRTRVLFIY |
1 | 6kfqA | 0.08 | 0.07 | 2.92 | 0.41 | CEthreader | | LWIGFVGMLLGTLYFAFLLTNAPEGTRYFFVITATITGIAAIAYLVMATGSGSTVLPDGREFYWARYIDWVLLALADPRRNVTFIASLIALDVVMILTGLWAGATVNVAGRAILFIISTAAFIGVLYLLVSRLFAEASRRTPAVAQIFRTLAVLTIVLWICYPIVWLIGTEGFGAVSLSVEVFLFMVLDLLAKVGFGLLLLSSRQALSDIGSG-------- |
2 | 6u8yH | 0.06 | 0.05 | 2.42 | 0.62 | EigenThreader | | ALLIALPLISAFFVPVLKQIYAGGWKPPIGIMALFNFKAVTVEPTAISAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLVGVALIYGATVVQVGLALIIFGLAVEAELFPLNAWAPDAYQTKLLIAMATLTVVFAELSAKNVKRMIAYSSIGQVGLIALALSLGTQEGVS-----------AGVFHMLNHAIVKTMMFMAIGYVGITLGGTMIENFEGLG |
3 | 6uxvB | 0.08 | 0.07 | 2.90 | 0.60 | FFAS-3D | | -ALNTLLVTSADSNLKISLVKYPTSDYYYEDAGSNQYYVTQHDKMVDKIFEKVNNNVKQWDLLPEPIRFLPNRTPYLTSLKKIKDEIDDPFTKI------NTRGAEDPKVLINDQLSTISMILRNISFYLKRFISDLLLVLIHPENFTCNRKI-LNFKKDLVIVLSNISHLLEIASSIDCLLILILVISFYQTFGVDILAKLLNYFKSILLNKNHK----- |
4 | 6ukjA | 0.09 | 0.06 | 2.43 | 0.72 | SPARKS-K | | AMVSFFQLFTSCL----------------------------ILPVYTLPFLKQLHLPYNEIW---------------TNIKNGFACLFLGRNTVVENCGLGMAKLCDDCDGA--WKTFALFSFFDICDNLITSYIIDKSTMTYTIVSCIQGPALAIAYYFKF---LAGDVVREPRL-------LDFVTLFGYLFGSIIYRVGNIILERKKMRN-------- |
5 | 4he8F | 0.18 | 0.07 | 2.36 | 0.87 | CNFpred | | ----------------------------------------------------------------------------------------------------------------VTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAY----------STISQLGYMFLAAGVGAYWVALFHVFTHAFFK---------ALLFLA |
6 | 4av3A | 0.09 | 0.06 | 2.23 | 0.83 | DEthreader | | -------------------------------------------------------------------V---IALMWQTVAVIFGKWMGQ-----VDNLNPFAASYMIVILISYPIFFALVGLGCSMLGSLWTSALTVVWAIGVAIAALGMLSVSVSVDSYGPIADNAGSVRKITDHLDAVGNTTAAIGKGFAIGSAIFAALSLFASYMFSQIPSVL----- |
7 | 3rkoL | 0.06 | 0.06 | 2.70 | 0.58 | MapAlign | | VVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAG-VYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGLAYSTMSQIGYMFLALGDAAIFHLMTHFFKALLFLASGSVQNIFKMGGLRKSIPLVYLCFLVGGAALSTAGFFSKDEILAGAMANGHINLMVAGL- |
8 | 2kr6A | 0.15 | 0.12 | 3.97 | 0.52 | MUSTER | | MVWLVNMAEGDPEAQRRVSKNSKYNAESTERESQDTVAENDDGGFSEEWEAQRDSHLGPHRST---------------PESRAAVQELSSSILAGEDPEER-------GVKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAIL----IGLCLTLLLLAIFKKALPALPISITF------------------GLVFYFATDYLVQPFMDQLAFHQFYI- |
9 | 1vt4I3 | 0.10 | 0.06 | 2.32 | 1.30 | HHsearch | | ---------------------------------------------------EYALHRVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH---------------LKNIEHPE-----RMT---LFRMVFLDFRFLEQKIRHDSTAW--NASGSILNTLQQLKFYKPYICDN--D---PKYERL---VNAILDFLPKCSKYTDLLRIAL---MAEDEAIFEEA |
10 | 3rkoL1 | 0.10 | 0.09 | 3.31 | 0.41 | CEthreader | | LIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEG------------------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIG-----------FYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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