Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHSSSSCCCCCCCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCCCCCCCCCCCCCC MTVQRLVAAAVLVALVSLILNNVAAFTSNWVCQTLEDGRRRSVGLWRSCWLVDRTRGGPSPGARAGQVDAHDCEALGWGSEAAGFQESRGTVKLQFDMMRACNLVATAALTAGQLTFLLGLVGLPLLSPDAPCWEEAMAAAFQLASFVLVIGLVTFYRIGPYTNLSWSCYLNIGACLLATLAAAMLIWNILHKREDCMAPRVIVISRSLTARFRRGLDNDYVESPC |
1 | 5xnyA | 0.09 | 0.09 | 3.50 | 0.51 | CEthreader | | LRLIGDDLDRAADALAALAADHRDTPMAGWLELVSEAAGRARLRDGLPFSLGGAAGTLAGYFDPAVLLDRLLDAYAAETGLARPVLPWHVLRTPVADLAAVLAFTAGALGKIAVDVQSLARTEVAEVAEPRN--PVLSTLIRSAALQVPALATGLTQCLVSEDERSAGAWHAEWQPLRECLRLTGGAARTAVELAAGLEVDAARMRANLDLTDGRIVSESVAVALT |
2 | 6idpA | 0.10 | 0.10 | 3.75 | 0.57 | EigenThreader | | LGVLPLAAQGFPIQMVIIGIQVGLGIATTAVISRAIGAGKVCRANGNTLDPIFIFTFDLGIDGAAIATIIAFGVGIAIVAPKVAQRPPMIGRMLGALVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPISLGALGICMLMVSVANALGKSYVALTISALRLFALPCLWLGAHFYGIEGLFIGALVGNIIAGWAAWLAYQKALRSENLYF |
3 | 6qkcI | 0.16 | 0.12 | 3.81 | 0.96 | FFAS-3D | | -----QVLLTTIGAFAAFGLMTIAISTDYW----LYTRGLTHSGLWRIC--------------CLEGLKRGVCVKINHFA------------EYLLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRN--IILGAGILFVAAGLSNIIGVIVYISANAHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSR------------------------------- |
4 | 6qkcI | 0.17 | 0.12 | 3.93 | 0.54 | SPARKS-K | | ----VQVLLTTIGAFAAFGLMTIAISTDYWL----YTRGLTHSGLWRICCLEGLKRG--------------VCVKINHFAE-----------YLLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRN---IILGAGILFVAAGLSNIIGVIVYNAGKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSR------------------------------- |
5 | 7a23M | 0.10 | 0.07 | 2.46 | 0.82 | CNFpred | | EFSERRQIFLWIAFFASFAVKVPMVPVHIWLPEAHV-----EAPTAGSVILAG----------------------------------ILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQ-----GIGGSILLMLSHGLVSSALFLCVGVLYDRH-------------------------------- |
6 | 5vjsA | 0.08 | 0.05 | 2.10 | 0.83 | DEthreader | | QEHQQLAQEFQQLLQEIQQLGRELLKGEQGIKQLEASEKA----------------------------------------------LQKILDEEKHIELLETLQQTGQEAQQLLQELQQTGQELWQLGGSGPELRQKHQQLAQKIQQLLQKHQQLGAKIL-EDEELIKQYRELQQLGQKAQQLVQKLQQTGQKLWQL----------------------------- |
7 | 3c8tA | 0.08 | 0.08 | 3.00 | 0.76 | MapAlign | | --DGLALISRRIESVRKALAALARNHRDTPMAGRTHLQHALPVTFGLVVEFSGASGTLASLGTRGLDVQRELARELNLG---VPSITWHSARDAVAETVQFLALVSGSLGKLAMDISIMMTTELGEVAE---PNPVSCELILAGARIVRNHATSMLDAMIHDFERATGPWHLEWSAVPEGFAVASGILYQAEFGRKEAHDIVYLGCRRAVEDKTGLFEVLRTMPEV |
8 | 5kk2E | 0.16 | 0.12 | 3.99 | 0.72 | MUSTER | | --RGVQMLLTTVGAFAAFSLMTIAVGTDYWLY--SRGEVMTHSGLWRTCC-----------------NFKGLCKQID--HEDADYEA--DTAEYFLRAVRASSIFPILSVILLFMGGLCIAAS------ERHNIILSAGIFFVSAGLSNIIGIIVYISANAGYSYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATA-----RAT----------------- |
9 | 6qkcI | 0.17 | 0.12 | 3.92 | 1.86 | HHsearch | | ----VQVLLTTIGAFAAFGLMTIAISTDYWLYTR----GLTHSGLWRICCLEGLK--------------RGVCVKINH------FAE------YLLRVVRASSIFPILSAILLLLGGVCVAASRVYK-SKRNII--LGAGILFAAGLSNIIGVIVYISNKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSR------------------------------- |
10 | 5vhxE | 0.12 | 0.09 | 3.12 | 0.51 | CEthreader | | TSRRGRALLAVALNLLALLFATTAFLTTYWCQGTQRVPFQLRRFHTGI---------------------------WYSCEEGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHSSDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGWSFCLAWGSFTCCMAASVTTLNSYTK--------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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