Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCCCCCCSSSSSSSCCCCSSSSSSCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSSCCCSSCCCCCCHHHCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC MFVQEEKIFAGKVLRLHICASDGAEWLEEATEDTSVEKLKERCLKHCAHGSLEDPKSITHHKLIHAASERVLSDARTILEENIQDQDVLLLIKKRAPSPLPKMADVSAEEKKKQDQKAPDKEAILRATANLPSYNMDRAAVQTNMRDFQTELRKILVSLIEVAQKLLALNPDAVELFKKANAMLDEDEDERVDEAALRQLTEMGFPENRATKALQLNHMSVPQAMEWLIEHAEDPTIDTPLPGQAPPEAEGATAAASEAAAGASATDEEARDELTEIFKKIRRKREFRADARAVISLMEMGFDEKEVIDALRVNNNQQNAACEWLLGDRKPSPEELDKGIDPDSPLFQAILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDPETGPVMLQISRIFQTLNRT |
1 | 1oqyA | 0.14 | 0.10 | 3.55 | 1.71 | FFAS-3D | | -----------SAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPV----AGQKLIYAG--KILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAP-------------TTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQIQVTPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDD------------------------------------------------------------------------- |
2 | 1oqyA | 0.17 | 0.12 | 3.99 | 3.32 | HHsearch | | -----------SAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEK-GR---DAFPVAGQKLIYA--GKILSDDVPIRDYRIDEKNFVVVMVKTKAGQGTSAPP------EASPTAAPESSTSFPPAMSHPPPAEDSPAPTTSPESVSGS-V-------PSSGSSGREEDAA--------S---TLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQFQNMRQVIQQNFIQMQVTPEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFD----DE-------------------------------------------------------------------- |
3 | 1oqyA | 0.12 | 0.10 | 3.69 | 0.61 | CEthreader | | -----------SAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKG----RDAFPVAGQKLIYA--GKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESA-------------PTTSPESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQFQNMRQVIQQLLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGEVGAIGEEAPQMNYIQVTPQEKEAIER-LKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDE-------------- |
4 | 6tdaL | 0.07 | 0.07 | 2.72 | 0.88 | EigenThreader | | FKTPKAYKDTRNFIINTYRLSYLTITAVRRNVAMDVASIVKIHAFLEKWGCHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGSSDFIRLENNEDQWEKIADHVVEDCIEKFLSL-PIEDNYIR-----EVVGSKLMECVNDAVQTLLETQLEMEKLEKMLNDRLSLSKQILDLNKSLEELNVSIPSFAFKTPKAYKDTRNFIINTYRITAVRRNVAMDVASIVKIHAWGLINYQIDPRTKPSLIGP------------SFTGHFQQ--------------GLKPFLPVKLLLEGIEMYEDQWEKIADHVGGHKRVE-DCIEKFLSLPIEDNYIREVVGSIEESQAIIQELVKLTMEKLESKFTKDLETQLEMEKLKYVKESEKMLNDRLSLSKQILDLNKSLE |
5 | 1qzeA | 0.15 | 0.08 | 2.59 | 1.27 | FFAS-3D | | ------------AVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFP----VAGQKLIYAG--KILSDDVPIRDYRIDEKNFVVVMVTGSE---------YETMLTEIMSMGYERERVVAALRASYNN------PHRAVEYLLTLEFLRDQPQFQNMRQVIQQNPALLPALLQ----------------------------------------------------------------------------------QLGQENPQLLQQISRHQEQFIQMT--PQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQN---------------------------------------------------------------------------- |
6 | 1qzeA | 0.18 | 0.09 | 3.06 | 0.82 | SPARKS-K | | -----------SAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVA----GQKLIY--AGKILSDDVPIRDYRIDEKNFVVVMVT-----------------------------------------------------------------------------------------------GSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTL--EFLRDQPQFQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQM--TPQEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNF--------------------------------------------------------------------------- |
7 | 1oqyA | 0.16 | 0.12 | 3.84 | 0.88 | CNFpred | | -------------VTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKG----RDAFPVAGQKLIYA--GKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPT-----------------------GSSGREEDAASTLV---TGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQFQNMRQVILPALLQQLGQ-EKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDE------------------------------------------------------------------------ |
8 | 6vr4A | 0.06 | 0.04 | 1.69 | 0.67 | DEthreader | | ---------------------------------------------------------------------------------------------------NDLDRFDSFYDNIKHSDEESIV--FS-------DAELEDVTQEGLNEGLQDLQNDNGSISIDQLADKLNKVLRGGTSYHFITIAFTDHFSEVNRKEAYQELETLP-------------VHYHTDARGNVKDGKLAFDQIQNELKEQLIQ--NK-N----LTEFDISHVVSDFTLNSIASIYTFKVPATYTNKGVKYSQAV-SIVLDGVKV-------PPTGSDFDIPIDFPKDIKTYAGGKSGGI-NTYTSSVIQPVLRELAD-FTQRYESKIIPKE------I-EKY-TID--L-----SRDDSN |
9 | 3ihpB | 0.11 | 0.09 | 3.37 | 0.97 | MapAlign | | DRVHKDECAFSFDGLYIC-M--NTFLGFGKQY---VERHFNKQRVYLHLRRTDEDVKIVILLWLNLTDGSILCGRRHAVEHYRETGYLAVKLGFGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLLFFLHLINMVLEYEEKKRQAEEGLQPGEEELPDILDESVIIQLVEMGFPMDACRKAVYYTGNGAEAAMNWVMS-------------------------------------------HMDDPDFANPLILDPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIF----------------SHIDDLDAEAAMDGPGPGKYQLFAFISHMGTSTMCGHYVCHIKWVIYKPPKDLGYIYFYQR-- |
10 | 1oqyA | 0.15 | 0.11 | 3.75 | 0.75 | MUSTER | | -----------SAVTITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKG----RDAFPVAGQKLIY--AGKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESSTSFPPAPTSGMSHPPPAAREDKSPSEESAPTTS-------------PESVSGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIPGSPEPEHGSVQESQVSEQPATEAAGENPLEFLRDQPQFQNMRQVIALLPALLQ-EAPKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDDE------------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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