Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCCCCCSSSSSSSSSCCHHHHHCCCHHHHHHCCCCCCCCCCCCSSSCCCCCCCCSSSSSSCCCCCCSSCCCCCCCCCCCCCCCCCCCSCCSSSCCCCCCCCCCCCCSCCCCCCCCCCSSSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCCCCCCCCCCCCSSCCCCCCSSCCCCCCCCSCCCCCCCCCCCCCCCCCSSCCCCCHCHHHCCSCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCSCCCCCCCSSCCCCCHHHSCCCCCCCCCSCCCCCCCSSCCCCCCCCSSCCCCCCCCSCCCCCCCSSCCCCCCCCSCCCSCCCCCSCCCCCCCSSCCCCCCCCSCCCCCCCCCCCCCCCCCSSCCCCCCCCSSCCSCCCCCSCCCCCCCSSCCCCCHHHHHCCCCCCCCC MAAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQPDVIFQLKRGDKPWMVDLHGSEEREWPESVSLDWETKPEIHDASDKKSEGSLRECLGRQSPLCPKFEVHTPNGRMGTEKQSPSGETRKKSLSRDKGLRRRSALSREILTKERHQECSDCGKTFFDHSSLTRHQRTHTGEKPYDCRECGKAFSHRSSLSRHLMSHTGESPYECSVCSKAFFDRSSLTVHQRIHTGEKPFQCNECGKAFFDRSSLTRHQRIHTGESPYECHQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGDPRYQCNECGKAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECTVCGKVFSSKSSVIQHQRRYAKQGID |
1 | 5u1sA | 0.04 | 0.03 | 1.50 | 0.83 | DEthreader | | SIGILAMHNVDHLNLSSEIIF-----------------N-TNLFQAHSLKNILYPH----A--G--SHSFLL-------------QSAQKKIEIFSLFNCMLNTSFVFDFCQNAFIHCFLIFIEFNSSEIM-LSVLYGSIENIPSNWSQLSRMIFSELLIRIKITKLY-NK-LQ-----DKLSIELSLCIKSDLDAMMKLHASSLINVHL---K-LLNIKINEAQALLLSKELSRIILEEPIIVYRCLHHTLGKANK--------TMFLYDNKEFVKLEQ------------NLWKLHGKDIDDNVRVLLESLKLD----TLDNHELSKISLTDLPRHMPL----NVITIDFCPGNLLLRLLIENSWFNGV-NLMEDLIYF-VLDILLFHGEEN------------------------------- |
2 | 5v3jE | 0.45 | 0.29 | 8.59 | 7.21 | SPARKS-K | | -------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGE----KPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----- |
3 | 1vt4I3 | 0.07 | 0.06 | 2.58 | 1.55 | MapAlign | | RHDSTAWNASGSILNTLQQLKFY-KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIF----------------EEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGG--GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 5v3jE | 0.45 | 0.29 | 8.53 | 1.55 | MapAlign | | --------------------PHKCKECGKAFHTPSQLSHHQKLHVG---------------------------------------------------------------------------------------------------------------------------EKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIH------ |
5 | 6govY | 0.06 | 0.06 | 2.56 | 1.29 | MapAlign | | VPLDGGRFATSDLNDLYRRVINRNNRLKRLAPDIIVRNEKRMLQEAVDAL-----LDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVG---PYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRGIQAFEPLMMSLASLHARVKVRITEYEKLAKTSLVGRAILWKGMMDNLQTETVINRQEEKQSFNGSAAQIRQLA--GMRGLMAKPIIPINFQYFISTHGARKRVLGRVTVILVPRTLLHEQWCDLLVDAVGSIKLSNITSRNTELKLIDYKVPYGAVLVRFTDMTISLVVLPALKQYFLKAIVQLEEISGIVSFKRRLVITPEGERVTRYIVNEVQLRKATIGSSGEQVE-YSRVKIANRELEANGKV |
6 | 5v3jE | 0.45 | 0.29 | 8.53 | 1.10 | CEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPS----QLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----- |
7 | 5v3jE | 0.46 | 0.30 | 8.72 | 3.35 | MUSTER | | -------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----- |
8 | 5v3jE | 0.45 | 0.29 | 8.59 | 2.50 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHH----QKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----- |
9 | 5v3jE | 0.46 | 0.30 | 8.72 | 2.76 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----- |
10 | 5v3jE | 0.43 | 0.28 | 8.15 | 1.57 | EigenThreader | | --------------------------------------------------------------------------------------------------------------------------------------------PHKCKECG---KAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQVHTGETPYKCK-ECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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