Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCCCCCCSSSCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCSSCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCSSSSSCCCCCSSSSSSCCCCSSSSSCCCCCSSSSSSCCCCCCCCSSSSCCCSSSSSCCCSSSSSCCCCCSSSSSCCCCCCCCCSSSSCCCCCSSSSCCCCSSSSSCCCCCSSSSSCCCCCCCCCCCCCSSSSSCCCCCSSSSSCCCCSSSSSCCCCCSSSSSSCCCCCCCCCCSSSSCCCCCSSSSSCCCCSSSSSCCCCCSSSSSSCCCCCCCCCSSSSSCCCCSSSSSCCCCSSSSSSCCCCCC PAPCLLPQLELHPGLLDKNCHLLRLSFEEQQPQKDGGKDGAGTQGGEESQSRREDEPKTERQGGVQPQAGDGAQTPKEEKAQTTREEGAQTLEEDRAQTPHEDGGPQPHRGGRPNKKKKFKGRLKSISREPSPALGPNLDGSGLLPRPIFYCSFPTRMPGDKRSPRITGLCPFGPREILVADEQNRALKRFSLNGDYKGTVPVPEGCSPCSVAALQSAVAFSASARLYLINPNGEVQWRRALSLSQASHAVAALPSGDRVAVSVAGHVEVYNMEGSLATRFIPGGKASRGLRALVFLTTSPQGHFVGSDWQQNSVVICDGLGQVVGEYKGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPKGSLLGDFLTAYHGLEKPRVTTMVDGRYLVVSLSNGTIHIFRVRSPDS |
1 | 6fptA | 0.16 | 0.10 | 3.49 | 1.00 | DEthreader | | --------------------------------------------------------------------------------------------------------------------D----------SVVLMSPDNKGE-S-RSYGGVGLPMASFGGEGDGDQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFGTGSFDRPAGVACDSRRIIVADDHRIQIFTFDGQFLLKFGEGQFNYPWDVAVN-FEGKILVSDTHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDCQSARFLGSEGTQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTHGNQMDRPSGIAVTPDGVIVAVDFNNRILMF------- |
2 | 6fptA | 0.17 | 0.15 | 4.95 | 1.35 | MUSTER | | PS-----GA-FATASKAHGEGIKRAL---------QGKPASFTVVGYDHDGEP---LSGGDSVSVVLMSPDGNLSSAESDHQDGTYTVSYLPKGEGEHLLSVLICNQHIEGS--------------------PFKVMVKSGRSYGGVGLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFGPGQFDRPAGVACDSQIVADKDNHRIQIFTFDGQFLLKFGEGQFNYPWDVAVNFEGKILVSDRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTGFGQMDRPSGIAVTPDGVVAVDFGNNRILMF------- |
3 | 7b2rA | 0.19 | 0.12 | 3.92 | 1.81 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------------------------------------------MNPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGGRSPQRPTGVAVHSGDIIIADYDWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSNHCFKVY------- |
4 | 6em5m | 0.08 | 0.08 | 2.97 | 0.62 | EigenThreader | | NPYEPLIDWFTRHEEVMPLTAV-----PEPKRRFVPSEKIENYQYDLWGDSTETNDHVMHLRAPKLPPPTNEESYNP--PEEYLLSPEEKEAWENTEYSERERNFIPQKYSALRKVPGYGESAPRVRKNKLNIDPELPSPKDLRPFPIRCSTIYAH-------KGKVRTLSIDPGLWLATGSDD-GTVRVWEITGREVYRTEENPDYHIECIEWNPGILAVAVGENIHLIVPPIDICITISCK--KTVKKLSWHRKGDYFVTVQPIIMDAKFPFKPQLFVCSRYSQQIPGARWLSKIDIHPRGDNLIASFDKRVLWHDLDLASTPYKTLRY--HEKAVRSVNFHKKLPLSSAADDGTIHVFHAYDDMMPLKKLTGHKVILGVLDAIWHPEAWLFSAGADNTARLWTT----- |
5 | 7b2rA | 0.18 | 0.11 | 3.70 | 0.37 | MapAlign | | ---------------------------------------------------------------------------------------------------------------------------------------------------DDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGPGQLQRPTGVAVHPGDIIIADYKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNG-HIIVVDNCCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSGHCFKVY------- |
6 | 6fptA | 0.17 | 0.14 | 4.69 | 1.89 | FFAS-3D | | ------------------------------VGYDHDGEPRLSGGDSVSVVLMSPDGNLSSAEVSD-----------------------------------HQDGTYTVSYLPKGEGEHLLSVLICNQHIEGSPFKVMVKSGRSYGGVGLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFGTLGSDRPAGVACDSQRVADKDNHRIQIFTFDGQFLLKFGEKGTKYPWDVAVNFEGKILVSDTNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTHGNGMDRPSGIAVTDGVIVAVDFGNNRILMF------- |
7 | 7b2rA | 0.18 | 0.12 | 3.78 | 0.48 | CEthreader | | ----------------------------------------------------------------------------------------------------------------------------------------------MNPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGPGQLQRPTGVAVHPGDIIIADYKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKCCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADSNHCFKVY------- |
8 | 6fptA | 0.15 | 0.14 | 4.56 | 1.71 | SPARKS-K | | -----------------------------------PSSGAFATASKAHGEGIKRALQGKPASFTVVGYDHDGEPRLSGGDSVSVVLMSPDGNLSSAEVSDHQDGTLPKGEGEHLLSVLICNQHIEGSPFKVMVKSGRSYGGVGLPM-----ASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFGPGQFDRPAGVACDSQRIIVADNHRIQIFTFDGQFLLKFGEKGTNYPWDVAVNFEGKILVSDTNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDCQSARFLGSGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTGFGQMDRPSGIAVTPDGVIVAVDFNNRILMF------- |
9 | 5a1uD | 0.13 | 0.09 | 3.11 | 0.66 | HHsearch | | --------------------------------------------------------------------------------------------------MP-------L----RLDIKRKLTARSDRVKSVDLHPTEPWMLASLYHETQTLVKTFEVCDL------PVRAAKFVARKNWVVTGADDMQIRVFNYTLERVHMFEA-HSDYIRCIAVHTQPFILTDDMLIKLWDWDKSCSQVFEG-HTHYVMQIVINPDNNQFASALDRTIKVWQGSSSPNFTLEG------HEKGVNCIDYYSGGDYLISGADDRLVKIWDYNKTCVQTLEGH---AQNVSCASFHPELPIIITGSEDGTVRIWHSTYRLESTLNY---GMERVWCVASLRGSNNVALGYEGSIIVKLGREEGK |
10 | 7b2rA | 0.20 | 0.13 | 4.04 | 2.09 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------------------------MNPEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFKSRFGIRGRQRPTGVAVHPSGIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQPTGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTDGHVVVADSGNHCFKVY------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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