Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
| | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCSSSSSSCCCCCCSSSCCCCCCCCCCCCCSSSCCCHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCC SRIGHLADALVPVADHVAEELQHLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWISYIHLMSPFVEHILWHVGLSACLGLTVALSLLSDIIALLTFHIYCFYVYGARLYCLKIHGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQLFIGTLLFTILLFLLPTTALYYLVFTLLRLLVVAVQGLIHLLVDLINSLPLYSLGLRLCRPYRLADKPTALQPRGAHLPPPQLWLPPQALLGRPVPQAVPWGAHLPLEAERGQAGLRELLARLAPPHGHSQPSALPGWHQLSWRMSCALWTLLCAPEHGRPCYHTLGLEVIGSEQMWGWPARLAALHHWHCLPWDPLPTCCGHHGGEHSNPRCPEHCPMPTLCTQVQRVRPPQQPQVEGWSPWGLPSGSALAVGVEGPCQDEPPSPRHPLAPSAEQHPASGGLKQSLTPVPSGPGPSLPEPHGVYLRMFPGEVAL |
1 | 3rkoB | 0.11 | 0.06 | 2.21 | 1.05 | CNFpred | | PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVE-MLMWATLMLLGGAVGKSAQL-PLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTEVLHLVGIVGAVTLLLAGFAA----------LVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILAC----EQNIFKMGGLRKSIPLVY--------LCFLVGGAALSALP--------VTAGFFS------KDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVF----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 2pffB | 0.05 | 0.05 | 2.46 | 1.08 | MapAlign | | PAELVGKFLGYKTKELIKNYIFEELRDLYQTYHVLVGDLIKFSAELSCPLIGVIQLAHYVVTAKLLGFTPGELRSTGHSQGLVTAVAIASVRKAITVLFFIGILEDSLENQEQVQDYVNKTNSHKQVEISLVNGAKNLVVSGPPQSLYGLNLTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEQGMGMDLYKTSKAAQDVWNRADNHFKDTFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQTGWLVEIVNYNV |
3 | 2pffB | 0.19 | 0.16 | 5.03 | 1.06 | HHsearch | | LEIHALAAKLLQENVKTKELIKNYIARIMARPFDKKSNSALFRAVGEGNA---QL--VAIFNTDDYF----------------------EELR-----DLYQTYVLVGDLIKFSAETLSELIRTTLDAELNILENSNTPDK---DYLLSIPISCPLIGVI---QLAHYVVTAKLLSYLVTAVAIAEWESFFVSVRKLFFIGVRCYEAYPNTSL------------PPSILEDSLNNEGVPSPM--LSISNLTQE-Q-VQ-DYVNKTNSHLPAGKQVEISLVNGAKNLVQSLYGLNLTLRKAPSGL---------------DQSRIPFSERK------LKFSFLPVAS----PFHSHLLVPASD--LINKDLVKNNVSFNDIQIPVYDTFDGSDLRVLSGSISERIVD--CIIRLPVKWETTQFKATHILDFGPG-GASGLGVLTKDGTGVRVIV-AGTLDI |
4 | 6o16A | 0.08 | 0.08 | 2.98 | 0.59 | CEthreader | | ITRRPVEDLILQMKALSIEKVINFPFPTPPSVEALVAAEELLVALGALQAQLSCPITALGRTMSPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELFEELDREKELAELKGRRARVAQMKRTWAGQGPSLKLGDLMVLLGAVGACEYAGCSPQFCQANGLRYKAMLEIRRLRGQLTTAVNAVCPEDPKMQPPTESQVTYLRQIMAAGLGDHLARRVQSLDPKWKNAYKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSTVE---IQWIPSLLPSYCQFDAPLEEPAPSYCPESGQVLCHRASVFYRVGWPLPAVQVDFPEGIDRYKYFAKFLLEGQVFRKLASFKSCLLSSPSTMLKTWARLQPRTETLLRALVAHKADSRDSLLAAWKKNPKYLLAEYCEWLPKAMHSDVEKNWPPTTD---------------------------- |
5 | 5lqwQ | 0.07 | 0.07 | 2.84 | 0.65 | EigenThreader | | EDQERHLMIKTIDRVLYQLKILVVAAPLLIDEDPMVRSTGQEIITNLSTFNVVLEPLWKGIRSHVLSSFLKAVGSMIAGYYTTEAMRIIRREFDSKKTILLVLQKCSAVVTYTTVTLAKKIDKLLTPLRDEAEPFRTMAVHAVTRTVNLGFGAVTVSLDLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLGSIINAMYCITSVMDLDPL----RNKHRKVEVNTIKFVGLIGKLPKEWMRICFELLELLKSIRRSANATFGFIAPHDVLVALLNNRVCTAVAIGIVAKIMNEYTTPETNVQNGVLKAMSFMFEYIDYIYFITPLLEDALTDLVHRQTASNVITHLALNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRILEGLEALSQALGPGLFMNYIWAGLFHPAKNVRKAFWRVYNNMYVMYQDAMVPFYPVTPDNN-------------- |
6 | 6w1sS | 0.18 | 0.16 | 5.31 | 0.77 | FFAS-3D | | WDILNLAEALLEQAMIILSYLKYAISSMVSCSSVLTAISKFDDFCVQALLDIMDMFCDCIGLCRALLSALHWLLRCTAASQLALCLQCLEKTLSKNRALLHIAKLEEASSWTAIEHSLLKLGEILANLSNPQLRSQAENLTGEMQPLVEQLMMVLFVLEIWKACFVKWTAFTYLKIPQVLVKDVNCAFEFLLKLTPLLNFLLQECNKQGLLSEVNFKRTADRDPQILRAEPTVTNILKTKSPEGLLKSLDLLLAAAAATGKLKSFARKFITTHGSGESTKTASVRALLFDISFLMLCHVA---------QTYGSEVILSESSSG--EEVPFFETWTCMP----------EEGKILNPDHPCFRPDSTKVESLVALLNNSKLVQMKWHEANIKGKVCLVAHVRMLGLDEPLYSENTLQFYNERVTATQIKFPSTGVDTMPYWNLLPP--------------- |
7 | 4btgA | 0.10 | 0.10 | 3.61 | 0.90 | SPARKS-K | | SMTSELLWEVGKGNIDPVMYARLFFQYAQAGLSVDELVNQFTEYHQSTACN-PEIWRKLTAYITAILEQLRSEHELFHHITTDFVCHVLSPLYVTATYPNFYALVDCVRASDLR-RMLTALSSVDSKMLQATFKAKGALAPALISQHLANAAVVSSVLTILGRLWGIDQLRSNLALF-IAYQDMVKQIEAMSEVSPINETTSYIGQTSAIDGQPSHVVVYEDWQFAKEITTPVKLANNSNQRFLDVEPGISRMSATLAPFAVSAFVKNRTYEAVSQRGTVNSNGAEMTLGF-PSVVERDYALDRDRTGIVDESLEARASNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAE-----QGSLYLVWNVRTELRIPVGYNAIEG---GSIRTPEPLEAIAYNKPIQPSEVLQAKVLDLANHHEASTEFAYEDAYSVTIRNKRYTKEFELLVRILKPTVAH |
8 | 4he8F | 0.09 | 0.05 | 2.04 | 1.01 | CNFpred | | PQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELK-DLLALAGLLLFLGAVGKSAQI-PLMVWLPDAMAGPTPVSALIHAATMVTAGVYLIARSSFLYSVLDVSYAIAVVGLLTAAYGALSA----------FGQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAL-----QDVRKMGGLWKHLPQTR--------WHALIGALALGGLP--------LLSGFWSKD---AILAATLTYPFGGVGFYVGALLVAVLTAMYAMRWFVLVFLG---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 4f4cA | 0.07 | 0.05 | 1.99 | 0.83 | DEthreader | | ----N-GSLRQSLRTLDSFSLAYLQFITGFIVAFTH-SWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAAGVVYSVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWV--H--------------------DGSLNFGDMLFFFMWAMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKL--N---------SLAGEKKKLYGKV--FSVEPV-L-R-------E-F-I------DGSEITLNPEHTR----------------------EPTLFDC--S--------------IAENIIY--LDPSSVTMQVEEAARLANIHN-FIAELPEGFETR-----TQLSGGQKQRIAIAALVRNPK---L---L-EA--EKVVQEALD-RAREGRTC--IVIAHRLNTVM-NAD----------------S---IIEKGTHTQLMSEK |
10 | 2j8sA | 0.05 | 0.05 | 2.38 | 1.03 | MapAlign | | --TTPFVKISIHEVVKTLVEAIILVFLVMY---LFLQNFRATLIPTIAVPVVLLGTFAVLAANTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVAGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLEDQGVFMTMVQLPAGATQERTEKNNVESVFAVNGFGFAGRGQNTGIAFVVEAITMRATRAFGFDFELIDQAGLGHEKLTQARNQLLAEAAVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPF----SAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIP- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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