>Q9BQM9 (153 residues) MGNYSSHKRTKAPKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANA GQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPR LLSRFRSPGKAPREAGPAEEQPRKRCRCPRPQL |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MGNYSSHKRTKAPKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRCRCPRPQL |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCC |
Confidence | 998665543458643233588304366788899886413876428999646877411136888766666778997551123677887511101589987514434554577531125445678744888898777824444110267887789 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MGNYSSHKRTKAPKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRCRCPRPQL |
Prediction | 855556454463465447743552554424500530455434130000011454542463454364355342444224304233745554441411212233455457644452343144025304554644574545675455635145668 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCC MGNYSSHKRTKAPKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANAGQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPRLLSRFRSPGKAPREAGPAEEQPRKRCRCPRPQL | |||||||||||||||||||
1 | 4fxgC | 0.07 | 0.07 | 2.76 | 0.51 | CEthreader | LCSAEVCQCAEGKCPRQRRALERGLQDEDGYRMKFACYYPRVEYGFQVKVLREDSRETKITQVLHFTKDVKAAANQMRNFLVRASCRLRLEPGKEYLIMGLDGATYDLEGHPQYLLDSNSWIEEMPSERLCRSTRQRAACAQLNDFLQEYGTQ | |||||||||||||
2 | 5cdiA2 | 0.06 | 0.06 | 2.52 | 0.57 | EigenThreader | -VQTDKDLANVACVSAGGNTDIGSLISDAMAKVTSPYFVRMICEYECKILLVYPLLIMAEEVLVVNKLRGTLKVIKAPIAILTGGTEQATDAVLGTAAKITIT----KERTTVVG--DG----STAADVAARVKQIRNLQMQTDQDYEREKLQ | |||||||||||||
3 | 4bluA2 | 0.13 | 0.08 | 2.93 | 0.40 | FFAS-3D | --------------------PPYEMKTDYQAVVSGIAKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKLPDSDRRGMTASGMNPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSW----------------------------------- | |||||||||||||
4 | 5urw1A | 0.10 | 0.08 | 2.93 | 0.64 | SPARKS-K | LGDF-TGQEDARPLEQRAPINVDKA-----NFNEVMAQQNLKVTLTAADKLSADPNAVSLQFKNLNDFSPESVVNQVP-----------ELKKLLELRSALNALKGPLGNLPAFRKKLQALLA---DEDGRKALIKELGLTEETK-------- | |||||||||||||
5 | 5klqA | 0.16 | 0.06 | 1.97 | 0.56 | CNFpred | ---------------------------RHNLTLEDLSESVPLSQVAIIETQ--------AQKTSD------------------------DCVMYSLNYAIKAHK---------NAAQFDDIHHGLQ--------------------------- | |||||||||||||
6 | 5lq3A | 0.07 | 0.06 | 2.40 | 1.00 | DEthreader | SSLAYK-I-PYDTKFVISIVLLTLFALILAIGIVVDDAIIVVPVIVLAV---------VGEIQRFALAVT---AYAFGAVGSFLVYNDFQGLIGLSAKNAILIVEFAEEAAALRFRPIIMTSLAFTFGVLPMSRHSLG--------------- | |||||||||||||
7 | 4h02A | 0.03 | 0.03 | 1.85 | 0.71 | MapAlign | RSKFIQDQKDKGINPYPHKFERTISIPEFIEKYKDLHLEDTILNITGRIMRVSASGQKLRFFDLVGDGEKIQVLANYSFHNHEKGNFAECIRRGDIVGIVGFPGKSKKGELSIFPKETILLSACLHMLPMKYGLKDTEIRYRQRYLDL----- | |||||||||||||
8 | 1jvrA | 0.18 | 0.16 | 5.11 | 0.66 | MUSTER | MGQIHGLSPTPIPKAPRGLSTHH-----WLNFLQAAYRLQPGPSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLIPGYPG---------RVVEIINILVKNQVSPSAPAAPVPTPICP-----TTTPPPPPPPSPEAHVPPPYVEPTTTQC | |||||||||||||
9 | 1sghB | 0.14 | 0.03 | 1.12 | 0.51 | HHsearch | FNISLAMAKERAHQKRSSKRAPQMDWSKKNELFSNL--------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 4ml8A | 0.07 | 0.07 | 2.76 | 0.49 | CEthreader | LSRLRFIQSTLFHTDVTYLEFLDRVHTSELKLRAQSLWEVPHPWLNLLIPRSSIRRFATEVFGRILKDSNNGPILLYPVNKSKWDNKTSVVIFYLVGFLSSAPSLSGHGSIAHAMSLNSQIVEFCEEADIGMKQYLAHYTTQEQWKTHFGARW | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |