Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| SS Seq | CSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCSSSSSSSSSCCSSSSSSSSCCCSSSSCCHHHHHHHCCCSSSCCCCCCCCCCCCCCSSSSSSSSSCCSSSSSSSSSSSCCCCCSSSSHHHHHHHCCSSSCCCCSSSSCCCCSSSCCCCCCCCCCC MLFIFPLSLPWRPSCWKESCSTGQRQAGRSREDSVTPPPSSPWPTPPAGAMSTKQEARRDEGEARTRGQEAQLRDRAHLSQQRRLKQATQFLHKDSADLLPLDSLKRLGTSKDLQPRSVIQRRLVEGNPNWLQGEPPRMQDLIHGQESRRKTSRTEIPALLVNCKCQDQLLRVAVDTGTQYNRISAGCLSRLGLEKRVLKASAGDLAPGPPTQVEQLELQLGQETVVCSAQVVDAESPEFCLGLQTLLSLKCCIDLEHGVLRLKAPFSELPFLPLYQEPGQ |
1 | 2cseW | 0.06 | 0.05 | 2.00 | 0.67 | DEthreader | | HVIMANIHLKTETLSV-----------------------N-PLMFRNVLHLLF--SIGRWMARLARMNIYRISNPNGSANPPEVLLL-PIDHQNELTNWRARLKLIKSMTMYQQLA-P-VELAVIAPMLPFPPFVNRDMITCEAMKAFIA-CV-LTAEVFN-----------HEYNLFG--IARGDIAPPPDLVFRIRITAWLEEITPTIPSVPFMVPIS------A-QYIIS-T--EYNDRS---L------F------CTNSSSPQHIPVERQLPEV-- |
2 | 3s8iA | 0.27 | 0.12 | 3.61 | 1.77 | SPARKS-K | | ------------------------------------------------------------------------------------------------------------------------------------------------------------VTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGVAKQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGELP-- |
3 | 6ykkA | 0.07 | 0.07 | 2.73 | 0.92 | EigenThreader | | -----MQEHYQPAAIEPAAQKKWDDARISNVSEDASKPFPYPSGKLHMGWDAFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSL---------------------GDWEREVATCKPEYYRWEQWLFTKLFEKGIITDYAEELLNDLDKLEHWPIGGMTVRFAVSDDSLQVYTTRGATYVAVAAAAAADKPELQAFIAECKAGSVAEKKGVPTGRYVVNPLNGDKLEVWIANYGDGAVMAVPKLQSQGPIVHCEK-CGNVPVPADQLPVVLPENVVPDG |
4 | 3s8iA | 0.24 | 0.10 | 3.22 | 0.89 | MapAlign | | -------------------------------------------------------------------------------------------------------------------------------------------------------------TMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMLVDRRWAGVAKGQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGEL--- |
5 | 3s8iA | 0.24 | 0.11 | 3.32 | 0.79 | CEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------VTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMLVDRRWAGVAKGQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGELP-- |
6 | 3s8iA | 0.27 | 0.12 | 3.61 | 1.11 | MUSTER | | ------------------------------------------------------------------------------------------------------------------------------------------------------------VTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGVAKQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGELP-- |
7 | 3s8iA | 0.29 | 0.12 | 3.80 | 3.18 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------VTMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAG-VAKGIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGELP-- |
8 | 3s8iA | 0.27 | 0.12 | 3.60 | 1.69 | FFAS-3D | | -------------------------------------------------------------------------------------------------------------------------------------------------------------TMLYINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGVAKQRIIGRVHLAQIQIEGDFLQCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTGTQTYFLPEGELP-- |
9 | 4rghA | 0.28 | 0.12 | 3.60 | 2.10 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------MLYINCKVNGHPVKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGIAK-KIIGRVHLAQVQIEGDFLPCSFSILEEQPMDMLLGLDMLKRHQCSIDLKKNVLVIGTTGSQTTFLPEGELP-- |
10 | 1miuA | 0.07 | 0.05 | 1.89 | 0.67 | DEthreader | | ----------ELVGSPD-ACAPLEA---PD-SLR--------DG-----VEKTVIREEEALRFAEAQQKKLEALFTKVHTEFK--------DGAELYAAV-LEACFSEQLR-LNNYRQMLNDKKQARIQSEFRKALESAEKEEGLS--R--DV--TTVWKLRVTSYKKEKSALLSIWRP----------------------------------------TEGKRYRIYHLAVSKSKSIQLTATKRTQ--Y-Q----------QLPVSS-YP-SN-GHFSIF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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